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BioLiP Library
Download all results in tab-seperated text for 36 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6ee2:A (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    2 6ee2:A (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    3 6ee2:A (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    PDBbind: -logKd/Ki=6.71, Ki=195nM
    4 6ee2:B (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    5 6ee2:B (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    6 6ee2:B (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    7 6ee2:C (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    8 6ee2:C (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    9 6ee2:C (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    10 6ee2:D (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    11 6ee2:D (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    12 6ee2:D (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    13 6ee2:E (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    14 6ee2:E (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    15 6ee2:E (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    16 6ee2:F (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    17 6ee2:F (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    18 6ee2:F (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    PDBbind: -logKd/Ki=6.71, Ki=195nM
    19 6ee2:G (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    20 6ee2:G (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    21 6ee2:G (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    22 6ee2:H (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    23 6ee2:H (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    24 6ee2:H (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    25 6ee2:I (2.1) BS01 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    26 6ee2:I (2.1) BS02 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    27 6ee2:I (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    28 6ee2:J (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    29 6ee2:J (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    30 6ee2:J (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    31 6ee2:K (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    32 6ee2:K (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    33 6ee2:K (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    34 6ee2:L (2.1) BS01 CO3 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    35 6ee2:L (2.1) BS02 ZN 3.4.11.1 GO:0005737 ... W4I9J7 30537832
    36 6ee2:L (2.1) BS03 J1V 3.4.11.1 GO:0005737 ... W4I9J7 30537832 MOAD: Ki=195nM
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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