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BioLiP Library

PDB CCD ID: DDY
Number of entries in BioLiP: 4
Chemical formula: C9 H15 N3 O9 P2
InChI: InChI=1S/C9H15N3O9P2/c10-7-3-4-12(9(13)11-7)8-2-1-6(20-8)5-19-23(17,18)21-22(14,15)16/h3-4,6,8H,1-2,5H2,(H,17,18)(H2,10,11,13)(H2,14,15,16)/t6-,8+/m0/s1
InChIKey: FVSQWXITYSICAK-POYBYMJQSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.7.0C1C[C@@H](O[C@@H]1CO[P@@](=O)(O)OP(=O)(O)O)N2C=CC(=NC2=O)N
CACTVS 3.370NC1=NC(=O)N(C=C1)[CH]2CC[CH](CO[P](O)(=O)O[P](O)(O)=O)O2
ACDLabs 12.01O=P(O)(O)OP(=O)(O)OCC2OC(N1C(=O)N=C(N)C=C1)CC2
OpenEye OEToolkits 1.7.0C1CC(OC1COP(=O)(O)OP(=O)(O)O)N2C=CC(=NC2=O)N
CACTVS 3.370NC1=NC(=O)N(C=C1)[C@H]2CC[C@@H](CO[P](O)(=O)O[P](O)(O)=O)O2
Name:2',3'-DIDEOXYCYTOSINE-5'-DIPHOSPHATE;
DDCDP
ChEMBL: CHEMBL1232161
ZINC: ZINC000032304118
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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