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BioLiP Library

PDB CCD ID: 8GA
Number of entries in BioLiP: 1
Chemical formula: C6 H12 O4 Se
InChI: InChI=1S/C6H12O4Se/c1-11-2-3-4(7)5(8)6(9)10-3/h3-9H,2H2,1H3/t3-,4-,5-,6+/m1/s1
InChIKey: UFNQFLPLDXICBS-KAZBKCHUSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 2.0.6C[Se]C[C@@H]1[C@H]([C@H]([C@H](O1)O)O)O
CACTVS 3.385C[Se]C[C@H]1O[C@H](O)[C@H](O)[C@@H]1O
ACDLabs 12.01C[Se]CC1OC(O)C(O)C1O
OpenEye OEToolkits 2.0.6C[Se]CC1C(C(C(O1)O)O)O
CACTVS 3.385C[Se]C[CH]1O[CH](O)[CH](O)[CH]1O
Name:5-Se-methyl-5-seleno-alpha-D-ribofuranose;
5-Se-methyl-5-seleno-alpha-D-ribose;
5-Se-methyl-5-seleno-D-ribose;
5-Se-methyl-5-seleno-ribose
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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