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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●DeepMSA2 ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP Library
>protein
LDIQRGATLFNRACAACHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRMPGFGEKCTPRGQCTFGPRLQDE
EIKLLAEFVKFQADQGWPT

The query sequence (length=99) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2dge:A 102 99 0.9798 0.9510 0.9798 1.28e-69 2ce0:A, 2ce1:A, 2dge:C, 2dge:B, 2dge:D, 2v07:A
2 7y5e:GN 84 96 0.3434 0.4048 0.3542 1.09e-14 7y5e:G2, 7y7a:G7, 7y7a:Go
3 1c6s:A 87 97 0.3535 0.4023 0.3608 1.32e-14 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
4 1gdv:A 85 96 0.3535 0.4118 0.3646 6.41e-14
5 4kmg:A 88 93 0.3333 0.3750 0.3548 2.33e-13
6 3dmi:A 87 98 0.3737 0.4253 0.3776 3.55e-13
7 4eie:A 82 93 0.3030 0.3659 0.3226 3.99e-13 4eif:A
8 2zbo:A 86 97 0.3535 0.4070 0.3608 7.25e-13 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
9 3ph2:B 85 96 0.3434 0.4000 0.3542 8.89e-13 2v08:A, 2v08:B
10 4gyd:A 86 96 0.3434 0.3953 0.3542 4.54e-12 4gyd:B, 4gyd:C, 4gyd:D, 4gyd:E, 4gyd:F, 4h0j:A, 4h0j:B, 4h0j:C, 4h0j:D, 4h0j:E, 4h0j:F, 4h0k:A, 4h0k:B
11 1cyj:A 90 100 0.3939 0.4333 0.3900 1.93e-11 1cyi:A
12 1kib:A 89 101 0.3434 0.3820 0.3366 3.21e-11 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
13 1a2s:A 89 95 0.3131 0.3483 0.3263 1.81e-07 1ced:A, 1ctj:A
14 3dp5:A 99 62 0.2323 0.2323 0.3710 5.21e-07 3cu4:A, 5mcs:A, 6u97:A
15 3dr0:A 93 90 0.3030 0.3226 0.3333 5.17e-06 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
16 1c6o:A 89 95 0.3131 0.3483 0.3263 5.50e-06 1c6o:B, 1c6r:A
17 7o38:A 81 87 0.2828 0.3457 0.3218 1.46e-05
18 1ls9:A 91 94 0.2727 0.2967 0.2872 4.68e-04
19 7qhm:C 233 89 0.2424 0.1030 0.2697 0.002 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
20 4lji:A 133 37 0.1414 0.1053 0.3784 0.019 4lji:B
21 6hwh:i 162 63 0.1919 0.1173 0.3016 0.021 6hwh:j
22 1kx2:A 81 88 0.2323 0.2840 0.2614 0.023 1kx7:A
23 6adq:C 223 63 0.1919 0.0852 0.3016 0.027 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
24 7y5e:VL 134 35 0.1313 0.0970 0.3714 0.089 7y5e:V6, 7y5e:v6, 7y5e:vL, 7y7a:V9, 7y7a:v9, 7y7a:VE, 7y7a:vE, 7y7a:VO, 7y7a:vO, 7y7a:VZ, 7y7a:vZ, 7y7a:Vm, 7y7a:vm
25 8wql:VD 135 35 0.1313 0.0963 0.3714 0.17 1f1c:A, 1f1c:B, 8wql:VE, 8wql:V1, 8wql:v1, 8wql:vD, 8wql:vE
26 1nml:A 316 102 0.2525 0.0791 0.2451 0.20 1rz5:A, 1rz6:A
27 3x15:A 87 88 0.2121 0.2414 0.2386 0.22 3x15:G, 3x15:D, 3x15:J, 2zxy:A
28 7e1w:O 223 63 0.1818 0.0807 0.2857 0.32 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
29 7e1w:O 223 101 0.2929 0.1300 0.2871 1.3 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
30 5b6q:A 76 88 0.2525 0.3289 0.2841 0.44 5b6q:B, 6k7c:A, 6k7c:C
31 2zyj:A 397 28 0.1212 0.0302 0.4286 0.49 3cbf:A, 3cbf:B, 2egy:A, 2egy:B, 2egy:C, 2egy:D, 2z1y:A, 2z1y:B, 2zp7:A, 2zp7:C, 2zp7:B, 2zp7:D, 2zp7:E, 2zp7:F, 2zyj:B
32 6f0k:E 182 72 0.2323 0.1264 0.3194 0.56
33 1cch:A 82 87 0.2424 0.2927 0.2759 0.79 1fi3:A, 2i8f:A
34 4yuu:V1 129 45 0.1515 0.1163 0.3333 0.94 4yuu:v1, 4yuu:V2, 4yuu:v2
35 1b7v:A 71 54 0.1616 0.2254 0.2963 1.0 1c75:A, 1k3g:A, 1k3h:A, 1n9c:A
36 6jlu:V 137 29 0.1212 0.0876 0.4138 1.0 8iwh:V, 8iwh:v, 6j3y:V, 6j3y:v, 6j3z:V, 6j3z:v, 6j40:V, 6j40:v, 8j5k:V, 8j5k:v, 6jlu:v, 7vd5:V, 7vd5:v
37 3jc9:Ma 355 27 0.1313 0.0366 0.4815 1.1 3jc9:Mb, 3jc9:Mc, 3jc9:Md, 3jc9:Me, 3jc9:Mf, 3jc9:Mg, 3jc9:Mh, 3jc9:Mi, 3jc9:Mj, 3jc9:Mk, 3jc9:Ml
38 3cp5:A 116 31 0.1313 0.1121 0.4194 1.3 6cuk:A, 6cun:A
39 7w2j:C 418 89 0.2323 0.0550 0.2584 1.4 8jej:C, 8jek:C, 8k6j:C, 8k6k:C, 7w2j:F, 7wsq:C, 7wsq:F, 8xcm:C, 8xcn:C
40 8eqm:V 131 32 0.1414 0.1069 0.4375 1.5 8eqm:v
41 5mxy:A 83 88 0.2323 0.2771 0.2614 1.5 5mxz:A
42 1fwq:A 115 24 0.0909 0.0783 0.3750 1.6 2fu5:A, 2fu5:B, 1hxr:A, 1hxr:B
43 3b9o:A 433 52 0.2020 0.0462 0.3846 2.4 3b9o:B
44 7x7i:A 583 46 0.1515 0.0257 0.3261 2.6 7x7i:B, 7x7j:A, 7x7j:B, 7x7k:A, 7x7k:B
45 8xr6:V 137 16 0.0808 0.0584 0.5000 2.9 8wb4:V, 8wb4:v, 8xr6:v
46 8snh:G 304 40 0.1212 0.0395 0.3000 3.1
47 7o9u:A 153 75 0.2222 0.1438 0.2933 3.3
48 3a0b:V 137 31 0.1313 0.0949 0.4194 3.3 3a0b:v, 3a0h:V, 3a0h:v, 2axt:V, 2axt:v, 5b5e:V, 5b5e:v, 5b66:V, 5b66:v, 7cji:V, 7cji:v, 7cjj:V, 7cjj:v, 7cou:V, 7cou:v, 7d1t:V, 7d1t:v, 7d1u:V, 7d1u:v, 6dhe:V, 6dhe:v, 6dhf:V, 6dhf:v, 6dhg:V, 6dhg:v, 6dhh:V, 6dhh:v, 6dho:V, 6dho:v, 6dhp:V, 6dhp:v, 5e79:V, 5e79:v, 5e7c:V, 5e7c:v, 7eda:V, 9evx:V, 9evx:v, 8ez5:V, 8ez5:v, 8f4c:V, 8f4c:v, 8f4d:V, 8f4d:v, 8f4e:V, 8f4e:v, 8f4f:V, 8f4f:v, 8f4g:V, 8f4g:v, 8f4h:V, 8f4h:v, 8f4i:V, 8f4i:v, 8f4j:V, 8f4j:v, 8f4k:V, 8f4k:v, 4fby:V, 4fby:i, 8gn0:V, 8gn0:v, 8gn1:V, 8gn1:v, 8gn2:V, 8gn2:v, 5gth:V, 5gth:v, 5gti:V, 5gti:v, 5h2f:V, 5h2f:v, 4il6:V, 4il6:v, 8ir5:V, 8ir5:v, 8ir6:V, 8ir6:v, 8ir7:V, 8ir7:v, 8ir8:V, 8ir8:v, 8ir9:V, 8ir9:v, 8ira:V, 8ira:v, 8irb:V, 8irb:v, 8irc:V, 8irc:v, 8ird:V, 8ird:v, 8ire:V, 8ire:v, 8irf:V, 8irf:v, 8irg:V, 8irg:v, 8irh:V, 8irh:v, 8iri:V, 8iri:v, 4ixq:V, 4ixq:v, 4ixr:V, 4ixr:v, 1izl:V, 1izl:0, 6jlj:V, 6jlj:v, 6jlk:V, 6jlk:v, 6jll:V, 6jll:v, 6jlm:V, 6jlm:v, 6jln:V, 6jln:v, 6jlo:V, 6jlo:v, 6jlp:V, 6jlp:v, 5kaf:V, 5kaf:v, 5kai:V, 5kai:v, 3kzi:V, 5mx2:V, 5mx2:v, 1mz4:A, 4pbu:V, 4pbu:v, 4pj0:V, 4pj0:v, 7rf1:V, 7rf1:v, 7rf2:V, 7rf2:v, 7rf3:V, 7rf3:v, 7rf4:V, 7rf4:v, 7rf5:V, 7rf5:v, 7rf6:V, 7rf6:v, 7rf7:V, 7rf7:v, 7rf8:V, 7rf8:v, 4rvy:V, 4rvy:v, 1s5l:V, 1s5l:v, 5tis:V, 5tis:v, 4tnh:V, 4tnh:v, 4tni:V, 4tni:v, 4tnj:V, 4tnj:v, 4tnk:V, 4tnk:v, 4ub6:V, 4ub6:v, 4ub8:V, 4ub8:v, 5v2c:V, 5v2c:v, 4v62:AV, 4v62:BV, 4v82:AV, 4v82:BV, 6w1o:V, 6w1o:v, 6w1p:V, 6w1p:v, 6w1q:V, 6w1q:v, 6w1r:V, 6w1r:v, 6w1t:V, 6w1t:v, 6w1u:V, 6w1u:v, 6w1v:V, 6w1v:v, 1w5c:T, 1w5c:V, 5ws5:V, 5ws5:v, 5ws6:V, 5ws6:v, 3wu2:V, 3wu2:v, 7yq2:V, 7yq2:v, 7yq7:V, 7yq7:v, 5zzn:V, 5zzn:v
49 7ou2:B 650 26 0.1212 0.0185 0.4615 3.9
50 7ou2:A 721 26 0.1212 0.0166 0.4615 4.5 5akb:E, 7oto:B, 7oto:A, 7ou0:B, 7ou0:A, 7ou4:A, 7ou4:B
51 1ng9:A 794 26 0.1212 0.0151 0.4615 4.5 7ai5:B, 7ai5:A, 7ai6:A, 7ai6:B, 7ai7:A, 7ai7:B, 7aib:B, 7aib:A, 7aic:A, 7aic:B, 5akb:A, 5akb:B, 5akc:A, 5akc:B, 5akc:E, 5akc:F, 5akc:I, 5akc:J, 5akd:A, 5akd:B, 5akd:E, 5akd:F, 5akd:I, 5akd:J, 1e3m:A, 1e3m:B, 6i5f:A, 6i5f:B, 3k0s:A, 3k0s:B, 1ng9:B, 1oh5:A, 1oh5:B, 1oh6:A, 1oh6:B, 1oh7:A, 1oh7:B, 1oh8:A, 1oh8:B, 1w7a:A, 1w7a:B, 1wb9:A, 1wb9:B, 1wbb:A, 1wbb:B, 1wbd:A, 1wbd:B, 2wtu:A, 2wtu:B, 3zlj:A, 3zlj:B
52 1cor:A 82 90 0.2323 0.2805 0.2556 4.7 6kq1:A, 6kq1:B
53 8uf3:A 187 22 0.0909 0.0481 0.4091 4.9 8uf3:B
54 2wys:B 516 41 0.1212 0.0233 0.2927 5.2 2w5f:A, 2w5f:B, 2wys:A, 2wze:A, 2wze:B
55 1fcd:C 174 23 0.0909 0.0517 0.3913 5.3 1fcd:D
56 2zof:A 478 21 0.1010 0.0209 0.4762 5.5 4ruh:A, 4ruh:B, 2zof:B, 2zog:A, 2zog:B
57 3hr4:A 189 44 0.1212 0.0635 0.2727 5.9 3hr4:C, 3hr4:E, 3hr4:G
58 2fyn:B 256 16 0.0808 0.0312 0.5000 6.2 8asi:C, 8asi:G, 8asj:C, 8asj:G, 2fyn:E, 2fyn:H, 2fyn:K, 2fyn:N, 2fyn:Q, 5kkz:B, 5kkz:F, 5kkz:L, 5kkz:P, 5kli:B, 5kli:F, 5kli:L, 5kli:P, 6nhh:B, 6nhh:F, 6nin:B, 6nin:F, 6nin:L, 6nin:P, 6nin:T, 6nin:X, 2qjk:B, 2qjk:E, 2qjk:H, 2qjk:K, 2qjk:N, 2qjk:Q, 2qjp:B, 2qjp:E, 2qjp:H, 2qjp:K, 2qjy:B, 2qjy:E, 2qjy:H, 2qjy:K, 2qjy:N, 2qjy:Q, 7tce:B, 7tce:F, 7tce:L, 7tce:P, 7tlj:F, 7tlj:B
59 1akk:A 104 17 0.0707 0.0673 0.4118 6.3 2b4z:A, 5c0z:A, 5c0z:D, 5c0z:B, 5c0z:C, 5c9m:A, 5c9m:D, 5c9m:B, 5c9m:C, 1crc:A, 1crc:B, 5df5:A, 5df5:B, 5df5:C, 5df5:D, 8dvx:A, 8dvx:D, 8dvx:B, 8dvx:C, 8dzl:A, 8dzl:B, 8dzl:C, 8dzl:D, 6ff5:A, 1fi7:A, 1fi9:A, 2frc:A, 1giw:A, 2giw:A, 1hrc:A, 1i5t:A, 5iy5:1, 5iy5:2, 3j2t:H, 3j2t:I, 3j2t:J, 3j2t:K, 3j2t:L, 3j2t:M, 3j2t:N, 3jbt:B, 3jbt:D, 3jbt:F, 3jbt:H, 3jbt:J, 3jbt:L, 3jbt:N, 5juy:H, 5juy:I, 5juy:J, 5juy:K, 5juy:L, 5juy:M, 5juy:N, 6k9i:A, 6k9j:A, 1lc1:A, 1lc2:A, 7ljx:A, 7ljx:B, 1m60:A, 6n1o:A, 6n1o:B, 6n1o:C, 6n1o:D, 2n3b:A, 3nbs:A, 3nbs:B, 3nbs:C, 3nbs:D, 3nbt:A, 3nbt:E, 3nbt:B, 3nbt:C, 3nbt:D, 3nbt:F, 4nfg:B, 3o1y:A, 3o1y:B, 3o1y:C, 3o20:A, 3o20:B, 3o20:C, 1ocd:A, 2pcb:B, 4rsz:A, 4rsz:B, 4rsz:C, 4rsz:D, 4rsz:E, 4rsz:F, 6suv:AaA, 6suv:BaB, 6suv:CaC, 6suv:DaD, 6suv:EaE, 6suv:FaF, 6suv:GaG, 6suv:HaH, 1u75:B, 3wc8:A, 1wej:F, 3wui:A, 5wve:B, 5wve:D, 5wve:F, 5wve:H, 5wve:J, 5wve:L, 5wve:N, 2ybb:Y, 5zkv:A
60 4xa7:A 226 49 0.1818 0.0796 0.3673 6.3
61 6lod:E 157 21 0.0909 0.0573 0.4286 6.5 6loe:E
62 3qcp:A 410 22 0.1010 0.0244 0.4545 6.7 3qd9:A, 3qd9:B, 3qd9:C, 3qd9:D
63 5djq:C 303 21 0.0808 0.0264 0.3810 7.2 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
64 8hn3:A 80 19 0.0808 0.1000 0.4211 8.3 8hn3:B
65 7xoi:A 465 30 0.1212 0.0258 0.4000 8.4 7xoi:C, 7xoi:E, 7xoi:G, 7xoi:I, 7xoi:K, 7xoi:M, 7xoi:O
66 6ceq:A 111 29 0.1212 0.1081 0.4138 8.6 6ceq:B, 6ceq:C
67 2yev:B 319 15 0.0808 0.0251 0.5333 9.0 2yev:E
68 1zrt:D 248 16 0.0707 0.0282 0.4375 9.5 6xi0:D, 6xi0:Q, 6xkt:D, 6xkt:Q, 6xku:D, 6xku:Q, 6xkv:D, 6xkv:Q, 6xkw:D, 6xkw:Q, 6xkx:D, 6xkx:Q, 6xkz:D, 6xkz:Q, 1zrt:Q
69 3hfr:A 266 28 0.1010 0.0376 0.3571 9.8 3hfr:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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