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BioLiP Library
Download all results in tab-seperated text for 140 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7vrj:0 (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    2 7vrj:0 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    3 7vrj:0 (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    4 7vrj:1 (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    5 7vrj:1 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    6 7vrj:1 (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    7 7vrj:1 (2.81) BS04 CRT N/A GO:0016020 ... N/A 35460693
    8 7vrj:1 (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    9 7vrj:2 (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    10 7vrj:2 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    11 7vrj:2 (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    12 7vrj:3 (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    13 7vrj:3 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    14 7vrj:3 (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    15 7vrj:3 (2.81) BS04 CRT N/A GO:0016020 ... N/A 35460693
    16 7vrj:4 (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    17 7vrj:4 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    18 7vrj:4 (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    19 7vrj:5 (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    20 7vrj:5 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    21 7vrj:5 (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    22 7vrj:5 (2.81) BS04 CRT N/A GO:0016020 ... N/A 35460693
    23 7vrj:6 (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    24 7vrj:6 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    25 7vrj:6 (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    26 7vrj:7 (2.81) BS01 UQ8 N/A GO:0016020 ... N/A 35460693
    27 7vrj:7 (2.81) BS02 CRT N/A GO:0016020 ... N/A 35460693
    28 7vrj:7 (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    29 7vrj:7 (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    30 7vrj:8 (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    31 7vrj:8 (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    32 7vrj:8 (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    33 7vrj:9 (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    34 7vrj:9 (2.81) BS02 CRT N/A GO:0016020 ... N/A 35460693
    35 7vrj:9 (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    36 7vrj:9 (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    37 7vrj:A (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    38 7vrj:A (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    39 7vrj:A (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    40 7vrj:A (2.81) BS04 CRT N/A GO:0016020 ... N/A 35460693
    41 7vrj:A (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    42 7vrj:B (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    43 7vrj:B (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    44 7vrj:B (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    45 7vrj:C (2.81) BS01 HEC N/A GO:0005506 ... N/A 35460693
    46 7vrj:C (2.81) BS02 HEC N/A GO:0005506 ... N/A 35460693
    47 7vrj:C (2.81) BS03 HEC N/A GO:0005506 ... N/A 35460693
    48 7vrj:C (2.81) BS04 HEC N/A GO:0005506 ... N/A 35460693
    49 7vrj:D (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    50 7vrj:D (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    51 7vrj:D (2.81) BS03 CA N/A GO:0016020 ... N/A 35460693
    52 7vrj:D (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    53 7vrj:D (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    54 7vrj:E (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    55 7vrj:E (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    56 7vrj:E (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    57 7vrj:F (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    58 7vrj:F (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    59 7vrj:F (2.81) BS03 CA N/A GO:0016020 ... N/A 35460693
    60 7vrj:F (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    61 7vrj:F (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    62 7vrj:G (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    63 7vrj:G (2.81) BS02 CRT N/A GO:0016020 ... N/A 35460693
    64 7vrj:I (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    65 7vrj:I (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    66 7vrj:I (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    67 7vrj:I (2.81) BS04 CRT N/A GO:0016020 ... N/A 35460693
    68 7vrj:I (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    69 7vrj:J (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    70 7vrj:J (2.81) BS02 CRT N/A GO:0016020 ... N/A 35460693
    71 7vrj:K (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    72 7vrj:K (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    73 7vrj:K (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    74 7vrj:L (2.81) BS01 BCL N/A GO:0009772 ... N/A 35460693
    75 7vrj:L (2.81) BS02 BPH N/A GO:0009772 ... N/A 35460693
    76 7vrj:L (2.81) BS03 UQ8 N/A GO:0009772 ... N/A 35460693
    77 7vrj:L (2.81) BS04 UQ8 N/A GO:0009772 ... N/A 35460693
    78 7vrj:L (2.81) BS05 BCL N/A GO:0009772 ... N/A 35460693
    79 7vrj:L (2.81) BS06 BCL N/A GO:0009772 ... N/A 35460693
    80 7vrj:L (2.81) BS07 UQ8 N/A GO:0009772 ... N/A 35460693
    81 7vrj:L (2.81) BS08 FE N/A GO:0009772 ... N/A 35460693
    82 7vrj:L (2.81) BS09 BPH N/A GO:0009772 ... N/A 35460693
    83 7vrj:L (2.81) BS10 MQ8 N/A GO:0009772 ... N/A 35460693
    84 7vrj:M (2.81) BS01 BPH N/A GO:0009772 ... N/A 35460693
    85 7vrj:M (2.81) BS02 BCL N/A GO:0009772 ... N/A 35460693
    86 7vrj:M (2.81) BS03 BCL N/A GO:0009772 ... N/A 35460693
    87 7vrj:M (2.81) BS04 FE N/A GO:0009772 ... N/A 35460693
    88 7vrj:M (2.81) BS05 BCL N/A GO:0009772 ... N/A 35460693
    89 7vrj:M (2.81) BS06 BPH N/A GO:0009772 ... N/A 35460693
    90 7vrj:M (2.81) BS07 MQ8 N/A GO:0009772 ... N/A 35460693
    91 7vrj:M (2.81) BS08 CRT N/A GO:0009772 ... N/A 35460693
    92 7vrj:M (2.81) BS09 MQ8 N/A GO:0009772 ... N/A 35460693
    93 7vrj:N (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    94 7vrj:N (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    95 7vrj:N (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    96 7vrj:O (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    97 7vrj:O (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    98 7vrj:O (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    99 7vrj:O (2.81) BS04 CRT N/A GO:0016020 ... N/A 35460693
    100 7vrj:P (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    101 7vrj:P (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    102 7vrj:P (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    103 7vrj:Q (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    104 7vrj:Q (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    105 7vrj:Q (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    106 7vrj:Q (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    107 7vrj:R (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    108 7vrj:R (2.81) BS02 CRT N/A GO:0016020 ... N/A 35460693
    109 7vrj:S (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    110 7vrj:S (2.81) BS02 CRT N/A GO:0016020 ... N/A 35460693
    111 7vrj:S (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    112 7vrj:S (2.81) BS04 CA N/A GO:0016020 ... N/A 35460693
    113 7vrj:S (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    114 7vrj:S (2.81) BS06 BCL N/A GO:0016020 ... N/A 35460693
    115 7vrj:T (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    116 7vrj:T (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    117 7vrj:T (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    118 7vrj:U (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    119 7vrj:U (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    120 7vrj:U (2.81) BS03 CA N/A GO:0016020 ... N/A 35460693
    121 7vrj:U (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    122 7vrj:V (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    123 7vrj:V (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    124 7vrj:V (2.81) BS03 BCL N/A GO:0016020 ... N/A 35460693
    125 7vrj:W (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    126 7vrj:W (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    127 7vrj:W (2.81) BS03 CA N/A GO:0016020 ... N/A 35460693
    128 7vrj:W (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    129 7vrj:W (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    130 7vrj:X (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    131 7vrj:X (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    132 7vrj:X (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    133 7vrj:Y (2.81) BS01 CRT N/A GO:0016020 ... N/A 35460693
    134 7vrj:Y (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    135 7vrj:Y (2.81) BS03 CA N/A GO:0016020 ... N/A 35460693
    136 7vrj:Y (2.81) BS04 BCL N/A GO:0016020 ... N/A 35460693
    137 7vrj:Y (2.81) BS05 CRT N/A GO:0016020 ... N/A 35460693
    138 7vrj:Z (2.81) BS01 BCL N/A GO:0016020 ... N/A 35460693
    139 7vrj:Z (2.81) BS02 BCL N/A GO:0016020 ... N/A 35460693
    140 7vrj:Z (2.81) BS03 CRT N/A GO:0016020 ... N/A 35460693
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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