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BioLiP Library
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2a3w:A (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    2 2a3w:A (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    3 2a3w:A (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    4 2a3w:B (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    5 2a3w:B (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    6 2a3w:B (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    7 2a3w:C (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    8 2a3w:C (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    9 2a3w:C (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    10 2a3w:D (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    11 2a3w:D (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    12 2a3w:D (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    13 2a3w:E (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    14 2a3w:E (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    15 2a3w:E (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    16 2a3w:F (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    17 2a3w:F (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    18 2a3w:F (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    19 2a3w:G (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    20 2a3w:G (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    21 2a3w:G (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    22 2a3w:H (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    23 2a3w:H (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    24 2a3w:H (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    25 2a3w:I (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    26 2a3w:I (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    27 2a3w:I (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    28 2a3w:J (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920 PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    29 2a3w:J (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    30 2a3w:J (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    31 2a3w:K (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    32 2a3w:K (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    33 2a3w:K (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920
    34 2a3w:L (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    35 2a3w:L (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    36 2a3w:L (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    37 2a3w:M (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    38 2a3w:M (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    39 2a3w:M (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    40 2a3w:N (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    41 2a3w:N (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    42 2a3w:N (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    43 2a3w:O (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    44 2a3w:O (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    45 2a3w:O (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920
    46 2a3w:P (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    47 2a3w:P (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    48 2a3w:P (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    49 2a3w:Q (2.2) BS01 CA ? GO:0001849 ... P02743 16036920
    50 2a3w:Q (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    51 2a3w:Q (2.2) BS03 CPJ ? GO:0001849 ... P02743 16036920 MOAD: ic50=3.8uM
    52 2a3w:R (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    53 2a3w:R (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    54 2a3w:R (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    55 2a3w:S (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    56 2a3w:S (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    57 2a3w:S (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    58 2a3w:T (2.2) BS01 CPJ ? GO:0001849 ... P02743 16036920
    59 2a3w:T (2.2) BS02 CA ? GO:0001849 ... P02743 16036920
    60 2a3w:T (2.2) BS03 CA ? GO:0001849 ... P02743 16036920
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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