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BioLiP Library
Download all results in tab-seperated text for 45686 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		DNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    3901 2gih:A
    (2.5)    		 BS01 >2gih:E (identical to 3e41:E, 3e41:F, 3e42:E, 3e42:F, 2gig:E, 2gig:F, 2gih:F)
    gccggtcgaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    3902 2gih:A
    (2.5)    		 BS02 >2gih:F (identical to 3e41:E, 3e41:F, 3e42:E, 3e42:F, 2gig:E, 2gig:F, 2gih:E)
    gccggtcgaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    3903 2gih:B
    (2.5)    		 BS01 >2gih:E (identical to 3e41:E, 3e41:F, 3e42:E, 3e42:F, 2gig:E, 2gig:F, 2gih:F)
    gccggtcgaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    3904 2gih:B
    (2.5)    		 BS02 >2gih:F (identical to 3e41:E, 3e41:F, 3e42:E, 3e42:F, 2gig:E, 2gig:F, 2gih:E)
    gccggtcgaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    3905 2gii:A
    (2.3)    		 BS01 >2gii:E (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:F, 2gij:E, 2gij:F)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3906 2gii:A
    (2.3)    		 BS02 >2gii:F (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:E, 2gij:E, 2gij:F)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3907 2gii:B
    (2.3)    		 BS01 >2gii:E (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:F, 2gij:E, 2gij:F)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3908 2gii:B
    (2.3)    		 BS02 >2gii:F (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:E, 2gij:E, 2gij:F)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3909 2gij:A
    (1.93)    		 BS01 >2gij:E (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:E, 2gii:F, 2gij:F)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3910 2gij:A
    (1.93)    		 BS02 >2gij:F (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:E, 2gii:F, 2gij:E)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3911 2gij:B
    (1.93)    		 BS01 >2gij:E (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:E, 2gii:F, 2gij:F)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3912 2gij:B
    (1.93)    		 BS02 >2gij:F (identical to 3e3y:E, 3e3y:F, 3e40:E, 3e40:F, 3e43:E, 3e43:F, 2gii:E, 2gii:F, 2gij:E)
    gccggttaaccggc
    		 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    3913 2gkd:A
    (-1.00)    		 BS01 >2gkd:B
    gcatatgatag
    		 ? N/A Q8KNF0 17168523 PDBbind: Kd=14uM
    3914 2gkd:A
    (-1.00)    		 BS02 >2gkd:C
    ctatcatatgc
    		 ? N/A Q8KNF0 17168523 PDBbind: Kd=14uM
    3915 2gli:A
    (2.6)    		 BS01 >2gli:C
    tttcgtcttgggtggtccacg
    		 ? GO:0000977 ... P08151 8378770
    3916 2gli:A
    (2.6)    		 BS02 >2gli:D
    acgtggaccacccaagacgaa
    		 ? GO:0000977 ... P08151 8378770
    3917 2glo:A
    (-1.00)    		 BS01 >2glo:B
    tgaggcgtcaac
    		 ? N/A Q9XTN4 16876822 PDBbind: Kd=30nM
    3918 2glo:A
    (-1.00)    		 BS02 >2glo:C
    gttgacgcctca
    		 ? N/A Q9XTN4 16876822 PDBbind: Kd=30nM
    3919 2gm4:A
    (3.5)    		 BS01 >2gm4:X
    cagtgtccgataatttat
    		 ? GO:0000150 ... P03012 16807292
    3920 2gm4:A
    (3.5)    		 BS02 >2gm4:Z (identical to 2gm4:I, 4i2c:C, 4i2e:C, 8ojb:C, 8ojc:C, 3v9x:F, 3v9x:G, 3v9x:H, 1zr2:Z, 1zr2:I, 1zr4:Z, 1zr4:I, 1zr4:W, 1zr4:O)
    aaa
    		 ? GO:0000150 ... P03012 16807292
    3921 2gm4:A
    (3.5)    		 BS03 >2gm4:Y (identical to 1gdt:D, 1gdt:F, 1zr2:Y, 1zr2:K, 1zr4:Y, 1zr4:K, 1zr4:V, 1zr4:N)
    ttatcggacactg
    		 ? GO:0000150 ... P03012 16807292
    3922 2gm4:B
    (3.5)    		 BS01 >2gm4:J
    agtgtccgataatttat
    		 ? GO:0000150 ... P03012 16807292
    3923 2gm4:B
    (3.5)    		 BS02 >2gm4:I (identical to 2gm4:Z, 4i2c:C, 4i2e:C, 8ojb:C, 8ojc:C, 3v9x:F, 3v9x:G, 3v9x:H, 1zr2:Z, 1zr2:I, 1zr4:Z, 1zr4:I, 1zr4:W, 1zr4:O)
    aaa
    		 ? GO:0000150 ... P03012 16807292
    3924 2gm4:B
    (3.5)    		 BS03 >2gm4:K
    ttatcggacact
    		 ? GO:0000150 ... P03012 16807292
    3925 2gws:A
    (2.4)    		 BS01 >2gws:T (identical to 2gws:F, 2gws:J, 2gws:N, 1xsl:B, 1xsl:F, 1xsl:J, 1xsl:N)
    cggcagcgcac
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3926 2gws:A
    (2.4)    		 BS02 >2gws:P (identical to 2gws:G, 2gws:K, 2gws:R)
    gtgcgg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3927 2gws:A
    (2.4)    		 BS03 >2gws:D (identical to 6ak8:D, 6ak9:D, 6akh:D, 2bcq:D, 2bcr:D, 2bcs:D, 2bcu:D, 2bcv:D, 3c5f:D, 3c5f:E, 3c5g:D, 3c5g:E, 7co6:D, 7co8:D, 7co9:D, 7coa:D, 7cob:D, 7coc:D, 7cod:D, 5cwr:D, 5cwr:C, 5dkw:D, 5dkw:C, 4fo6:D, 2gws:H, 2gws:L, 2gws:Q, 3hw8:D, 3hwt:D, 3hx0:D, 3hx0:I, 3hx0:N, 3hx0:S, 2ihm:D, 2ihm:E, 5iii:D, 5iij:D, 5iik:D, 5iil:D, 5iim:D, 5iin:D, 5iio:D, 5iio:H, 5iio:L, 5iio:P, 6ipd:D, 6ipe:D, 6ipf:D, 6ipg:D, 4k4g:D, 4k4g:H, 4k4g:L, 4k4g:P, 4k4h:D, 4k4h:H, 4k4h:L, 4k4h:P, 4k4i:D, 4k4i:H, 4k4i:L, 4k4i:P, 7kss:D, 7kst:D, 7ksu:D, 7ksv:D, 7ksw:D, 7ksx:D, 7ksy:D, 7ksz:D, 7kt0:D, 7kt1:D, 7kt2:D, 7kt3:D, 7kt4:D, 7kt5:D, 7kt6:D, 7kt7:D, 7kt8:D, 7kt9:D, 7kta:D, 7ktb:D, 7ktc:D, 7ktd:D, 7kte:D, 7ktf:D, 7ktg:D, 7kth:D, 7kti:D, 7ktj:D, 7ktk:D, 7ktl:D, 7ktm:D, 7ktn:D, 4lzg:D, 4m04:D, 4m0a:D, 7m07:D, 7m08:D, 7m09:D, 7m0a:D, 7m0b:D, 7m0c:D, 7m0d:H, 7m0d:L, 7m0e:H, 7m0e:L, 7m0e:P, 7m0e:U, 7m43:D, 7m44:D, 7m45:D, 7m46:D, 7m47:D, 7m48:D, 7m49:D, 7m4a:D, 7m4b:D, 7m4c:D, 7m4d:D, 7m4e:D, 7m4f:D, 7m4g:D, 7m4h:D, 7m4i:D, 7m4j:D, 7m4k:D, 7m4l:D, 3mda:D, 3mdc:D, 3mgh:D, 3mgh:G, 3mgi:D, 6p1m:D, 6p1n:D, 6p1o:D, 6p1p:D, 6p1q:D, 6p1r:D, 6p1s:D, 6p1t:D, 6p1u:D, 6p1v:D, 6p1w:D, 2pfn:D, 2pfo:D, 2pfp:D, 2pfq:D, 3pml:D, 3pml:G, 3pmn:D, 3pnc:D, 1rzt:D, 1rzt:H, 1rzt:L, 1rzt:P, 5twp:D, 5twq:D, 5twr:D, 5tws:D, 5txx:D, 5txz:D, 5tyb:D, 5tyc:D, 5tyd:D, 5tye:D, 5tyf:D, 5tyg:D, 5tyu:D, 5tyv:D, 5tyw:D, 5tyx:D, 5tyy:D, 5tyz:D, 8u0p:D, 7un7:D, 3upq:D, 3uq0:D, 3uq2:D, 6vez:D, 6vf0:D, 6vf1:D, 6vf2:D, 6vf3:D, 6vf4:D, 6vf5:D, 6vf6:D, 6vf7:D, 6vf8:D, 6vf9:D, 6vfa:D, 6vfb:D, 6vfc:D, 5vz7:D, 5vz8:D, 5vz9:D, 5vza:D, 5vzb:D, 5vzc:D, 5vzd:D, 5vze:D, 5vzf:D, 5vzg:D, 5vzh:D, 5vzi:D, 6wic:D, 6wid:D, 6wie:D, 4x5v:D, 4xa5:D, 1xsl:D, 1xsl:H, 1xsl:L, 1xsl:P, 1xsn:D, 1xsp:D, 4xus:D, 4ycx:D, 4yd1:D, 4yd2:D)
    gccg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3928 2gws:A
    (2.4)    		 BS04 >2gws:R (identical to 2gws:P, 2gws:G, 2gws:K)
    gtgcgg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3929 2gws:E
    (2.4)    		 BS01 >2gws:F (identical to 2gws:T, 2gws:J, 2gws:N, 1xsl:B, 1xsl:F, 1xsl:J, 1xsl:N)
    cggcagcgcac
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3930 2gws:E
    (2.4)    		 BS02 >2gws:G (identical to 2gws:P, 2gws:K, 2gws:R)
    gtgcgg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3931 2gws:E
    (2.4)    		 BS03 >2gws:H (identical to 6ak8:D, 6ak9:D, 6akh:D, 2bcq:D, 2bcr:D, 2bcs:D, 2bcu:D, 2bcv:D, 3c5f:D, 3c5f:E, 3c5g:D, 3c5g:E, 7co6:D, 7co8:D, 7co9:D, 7coa:D, 7cob:D, 7coc:D, 7cod:D, 5cwr:D, 5cwr:C, 5dkw:D, 5dkw:C, 4fo6:D, 2gws:D, 2gws:L, 2gws:Q, 3hw8:D, 3hwt:D, 3hx0:D, 3hx0:I, 3hx0:N, 3hx0:S, 2ihm:D, 2ihm:E, 5iii:D, 5iij:D, 5iik:D, 5iil:D, 5iim:D, 5iin:D, 5iio:D, 5iio:H, 5iio:L, 5iio:P, 6ipd:D, 6ipe:D, 6ipf:D, 6ipg:D, 4k4g:D, 4k4g:H, 4k4g:L, 4k4g:P, 4k4h:D, 4k4h:H, 4k4h:L, 4k4h:P, 4k4i:D, 4k4i:H, 4k4i:L, 4k4i:P, 7kss:D, 7kst:D, 7ksu:D, 7ksv:D, 7ksw:D, 7ksx:D, 7ksy:D, 7ksz:D, 7kt0:D, 7kt1:D, 7kt2:D, 7kt3:D, 7kt4:D, 7kt5:D, 7kt6:D, 7kt7:D, 7kt8:D, 7kt9:D, 7kta:D, 7ktb:D, 7ktc:D, 7ktd:D, 7kte:D, 7ktf:D, 7ktg:D, 7kth:D, 7kti:D, 7ktj:D, 7ktk:D, 7ktl:D, 7ktm:D, 7ktn:D, 4lzg:D, 4m04:D, 4m0a:D, 7m07:D, 7m08:D, 7m09:D, 7m0a:D, 7m0b:D, 7m0c:D, 7m0d:H, 7m0d:L, 7m0e:H, 7m0e:L, 7m0e:P, 7m0e:U, 7m43:D, 7m44:D, 7m45:D, 7m46:D, 7m47:D, 7m48:D, 7m49:D, 7m4a:D, 7m4b:D, 7m4c:D, 7m4d:D, 7m4e:D, 7m4f:D, 7m4g:D, 7m4h:D, 7m4i:D, 7m4j:D, 7m4k:D, 7m4l:D, 3mda:D, 3mdc:D, 3mgh:D, 3mgh:G, 3mgi:D, 6p1m:D, 6p1n:D, 6p1o:D, 6p1p:D, 6p1q:D, 6p1r:D, 6p1s:D, 6p1t:D, 6p1u:D, 6p1v:D, 6p1w:D, 2pfn:D, 2pfo:D, 2pfp:D, 2pfq:D, 3pml:D, 3pml:G, 3pmn:D, 3pnc:D, 1rzt:D, 1rzt:H, 1rzt:L, 1rzt:P, 5twp:D, 5twq:D, 5twr:D, 5tws:D, 5txx:D, 5txz:D, 5tyb:D, 5tyc:D, 5tyd:D, 5tye:D, 5tyf:D, 5tyg:D, 5tyu:D, 5tyv:D, 5tyw:D, 5tyx:D, 5tyy:D, 5tyz:D, 8u0p:D, 7un7:D, 3upq:D, 3uq0:D, 3uq2:D, 6vez:D, 6vf0:D, 6vf1:D, 6vf2:D, 6vf3:D, 6vf4:D, 6vf5:D, 6vf6:D, 6vf7:D, 6vf8:D, 6vf9:D, 6vfa:D, 6vfb:D, 6vfc:D, 5vz7:D, 5vz8:D, 5vz9:D, 5vza:D, 5vzb:D, 5vzc:D, 5vzd:D, 5vze:D, 5vzf:D, 5vzg:D, 5vzh:D, 5vzi:D, 6wic:D, 6wid:D, 6wie:D, 4x5v:D, 4xa5:D, 1xsl:D, 1xsl:H, 1xsl:L, 1xsl:P, 1xsn:D, 1xsp:D, 4xus:D, 4ycx:D, 4yd1:D, 4yd2:D)
    gccg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3932 2gws:I
    (2.4)    		 BS01 >2gws:J (identical to 2gws:T, 2gws:F, 2gws:N, 1xsl:B, 1xsl:F, 1xsl:J, 1xsl:N)
    cggcagcgcac
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3933 2gws:I
    (2.4)    		 BS02 >2gws:K (identical to 2gws:P, 2gws:G, 2gws:R)
    gtgcgg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3934 2gws:I
    (2.4)    		 BS03 >2gws:L (identical to 6ak8:D, 6ak9:D, 6akh:D, 2bcq:D, 2bcr:D, 2bcs:D, 2bcu:D, 2bcv:D, 3c5f:D, 3c5f:E, 3c5g:D, 3c5g:E, 7co6:D, 7co8:D, 7co9:D, 7coa:D, 7cob:D, 7coc:D, 7cod:D, 5cwr:D, 5cwr:C, 5dkw:D, 5dkw:C, 4fo6:D, 2gws:D, 2gws:H, 2gws:Q, 3hw8:D, 3hwt:D, 3hx0:D, 3hx0:I, 3hx0:N, 3hx0:S, 2ihm:D, 2ihm:E, 5iii:D, 5iij:D, 5iik:D, 5iil:D, 5iim:D, 5iin:D, 5iio:D, 5iio:H, 5iio:L, 5iio:P, 6ipd:D, 6ipe:D, 6ipf:D, 6ipg:D, 4k4g:D, 4k4g:H, 4k4g:L, 4k4g:P, 4k4h:D, 4k4h:H, 4k4h:L, 4k4h:P, 4k4i:D, 4k4i:H, 4k4i:L, 4k4i:P, 7kss:D, 7kst:D, 7ksu:D, 7ksv:D, 7ksw:D, 7ksx:D, 7ksy:D, 7ksz:D, 7kt0:D, 7kt1:D, 7kt2:D, 7kt3:D, 7kt4:D, 7kt5:D, 7kt6:D, 7kt7:D, 7kt8:D, 7kt9:D, 7kta:D, 7ktb:D, 7ktc:D, 7ktd:D, 7kte:D, 7ktf:D, 7ktg:D, 7kth:D, 7kti:D, 7ktj:D, 7ktk:D, 7ktl:D, 7ktm:D, 7ktn:D, 4lzg:D, 4m04:D, 4m0a:D, 7m07:D, 7m08:D, 7m09:D, 7m0a:D, 7m0b:D, 7m0c:D, 7m0d:H, 7m0d:L, 7m0e:H, 7m0e:L, 7m0e:P, 7m0e:U, 7m43:D, 7m44:D, 7m45:D, 7m46:D, 7m47:D, 7m48:D, 7m49:D, 7m4a:D, 7m4b:D, 7m4c:D, 7m4d:D, 7m4e:D, 7m4f:D, 7m4g:D, 7m4h:D, 7m4i:D, 7m4j:D, 7m4k:D, 7m4l:D, 3mda:D, 3mdc:D, 3mgh:D, 3mgh:G, 3mgi:D, 6p1m:D, 6p1n:D, 6p1o:D, 6p1p:D, 6p1q:D, 6p1r:D, 6p1s:D, 6p1t:D, 6p1u:D, 6p1v:D, 6p1w:D, 2pfn:D, 2pfo:D, 2pfp:D, 2pfq:D, 3pml:D, 3pml:G, 3pmn:D, 3pnc:D, 1rzt:D, 1rzt:H, 1rzt:L, 1rzt:P, 5twp:D, 5twq:D, 5twr:D, 5tws:D, 5txx:D, 5txz:D, 5tyb:D, 5tyc:D, 5tyd:D, 5tye:D, 5tyf:D, 5tyg:D, 5tyu:D, 5tyv:D, 5tyw:D, 5tyx:D, 5tyy:D, 5tyz:D, 8u0p:D, 7un7:D, 3upq:D, 3uq0:D, 3uq2:D, 6vez:D, 6vf0:D, 6vf1:D, 6vf2:D, 6vf3:D, 6vf4:D, 6vf5:D, 6vf6:D, 6vf7:D, 6vf8:D, 6vf9:D, 6vfa:D, 6vfb:D, 6vfc:D, 5vz7:D, 5vz8:D, 5vz9:D, 5vza:D, 5vzb:D, 5vzc:D, 5vzd:D, 5vze:D, 5vzf:D, 5vzg:D, 5vzh:D, 5vzi:D, 6wic:D, 6wid:D, 6wie:D, 4x5v:D, 4xa5:D, 1xsl:D, 1xsl:H, 1xsl:L, 1xsl:P, 1xsn:D, 1xsp:D, 4xus:D, 4ycx:D, 4yd1:D, 4yd2:D)
    gccg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3935 2gws:M
    (2.4)    		 BS01 >2gws:N (identical to 2gws:T, 2gws:F, 2gws:J, 1xsl:B, 1xsl:F, 1xsl:J, 1xsl:N)
    cggcagcgcac
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3936 2gws:M
    (2.4)    		 BS02 >2gws:R (identical to 2gws:P, 2gws:G, 2gws:K)
    gtgcgg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3937 2gws:M
    (2.4)    		 BS03 >2gws:Q (identical to 6ak8:D, 6ak9:D, 6akh:D, 2bcq:D, 2bcr:D, 2bcs:D, 2bcu:D, 2bcv:D, 3c5f:D, 3c5f:E, 3c5g:D, 3c5g:E, 7co6:D, 7co8:D, 7co9:D, 7coa:D, 7cob:D, 7coc:D, 7cod:D, 5cwr:D, 5cwr:C, 5dkw:D, 5dkw:C, 4fo6:D, 2gws:D, 2gws:H, 2gws:L, 3hw8:D, 3hwt:D, 3hx0:D, 3hx0:I, 3hx0:N, 3hx0:S, 2ihm:D, 2ihm:E, 5iii:D, 5iij:D, 5iik:D, 5iil:D, 5iim:D, 5iin:D, 5iio:D, 5iio:H, 5iio:L, 5iio:P, 6ipd:D, 6ipe:D, 6ipf:D, 6ipg:D, 4k4g:D, 4k4g:H, 4k4g:L, 4k4g:P, 4k4h:D, 4k4h:H, 4k4h:L, 4k4h:P, 4k4i:D, 4k4i:H, 4k4i:L, 4k4i:P, 7kss:D, 7kst:D, 7ksu:D, 7ksv:D, 7ksw:D, 7ksx:D, 7ksy:D, 7ksz:D, 7kt0:D, 7kt1:D, 7kt2:D, 7kt3:D, 7kt4:D, 7kt5:D, 7kt6:D, 7kt7:D, 7kt8:D, 7kt9:D, 7kta:D, 7ktb:D, 7ktc:D, 7ktd:D, 7kte:D, 7ktf:D, 7ktg:D, 7kth:D, 7kti:D, 7ktj:D, 7ktk:D, 7ktl:D, 7ktm:D, 7ktn:D, 4lzg:D, 4m04:D, 4m0a:D, 7m07:D, 7m08:D, 7m09:D, 7m0a:D, 7m0b:D, 7m0c:D, 7m0d:H, 7m0d:L, 7m0e:H, 7m0e:L, 7m0e:P, 7m0e:U, 7m43:D, 7m44:D, 7m45:D, 7m46:D, 7m47:D, 7m48:D, 7m49:D, 7m4a:D, 7m4b:D, 7m4c:D, 7m4d:D, 7m4e:D, 7m4f:D, 7m4g:D, 7m4h:D, 7m4i:D, 7m4j:D, 7m4k:D, 7m4l:D, 3mda:D, 3mdc:D, 3mgh:D, 3mgh:G, 3mgi:D, 6p1m:D, 6p1n:D, 6p1o:D, 6p1p:D, 6p1q:D, 6p1r:D, 6p1s:D, 6p1t:D, 6p1u:D, 6p1v:D, 6p1w:D, 2pfn:D, 2pfo:D, 2pfp:D, 2pfq:D, 3pml:D, 3pml:G, 3pmn:D, 3pnc:D, 1rzt:D, 1rzt:H, 1rzt:L, 1rzt:P, 5twp:D, 5twq:D, 5twr:D, 5tws:D, 5txx:D, 5txz:D, 5tyb:D, 5tyc:D, 5tyd:D, 5tye:D, 5tyf:D, 5tyg:D, 5tyu:D, 5tyv:D, 5tyw:D, 5tyx:D, 5tyy:D, 5tyz:D, 8u0p:D, 7un7:D, 3upq:D, 3uq0:D, 3uq2:D, 6vez:D, 6vf0:D, 6vf1:D, 6vf2:D, 6vf3:D, 6vf4:D, 6vf5:D, 6vf6:D, 6vf7:D, 6vf8:D, 6vf9:D, 6vfa:D, 6vfb:D, 6vfc:D, 5vz7:D, 5vz8:D, 5vz9:D, 5vza:D, 5vzb:D, 5vzc:D, 5vzd:D, 5vze:D, 5vzf:D, 5vzg:D, 5vzh:D, 5vzi:D, 6wic:D, 6wid:D, 6wie:D, 4x5v:D, 4xa5:D, 1xsl:D, 1xsl:H, 1xsl:L, 1xsl:P, 1xsn:D, 1xsp:D, 4xus:D, 4ycx:D, 4yd1:D, 4yd2:D)
    gccg
    		 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 16807316
    3938 2gxa:B
    (3.15)    		 BS01 >2gxa:M (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2hax:C, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3939 2gxa:C
    (3.15)    		 BS01 >2gxa:M (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2hax:C, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3940 2gxa:D
    (3.15)    		 BS01 >2gxa:M (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2hax:C, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3941 2gxa:E
    (3.15)    		 BS01 >2gxa:M (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2hax:C, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3942 2gxa:F
    (3.15)    		 BS01 >2gxa:M (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2hax:C, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3943 2gxa:G
    (3.15)    		 BS01 >2gxa:N (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D, 8w0a:B)
    ttttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3944 2gxa:H
    (3.15)    		 BS01 >2gxa:N (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D, 8w0a:B)
    ttttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3945 2gxa:I
    (3.15)    		 BS01 >2gxa:N (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D, 8w0a:B)
    ttttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3946 2gxa:J
    (3.15)    		 BS01 >2gxa:N (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D, 8w0a:B)
    ttttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3947 2gxa:K
    (3.15)    		 BS01 >2gxa:N (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D, 8w0a:B)
    ttttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3948 2gxa:L
    (3.15)    		 BS01 >2gxa:N (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D, 8w0a:B)
    ttttttt
    		 3.6.4.12 GO:0003677 ... P03116 16855583
    3949 2gzk:A
    (-1.00)    		 BS01 >2gzk:B
    gggatctaaacaatgc
    		 ? N/A P63159
    Q05066    		 16813837 PDBbind: Kd=140nM
    3950 2gzk:A
    (-1.00)    		 BS02 >2gzk:C
    gcattgtttagatccc
    		 ? N/A P63159
    Q05066    		 16813837 PDBbind: Kd=140nM
    3951 2h1k:A
    (2.42)    		 BS01 >2h1k:C (identical to 2h1k:E)
    agaaactcattagag
    		 ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    3952 2h1k:A
    (2.42)    		 BS02 >2h1k:D (identical to 2h1k:F)
    tctctaatgagtttc
    		 ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    3953 2h1k:B
    (2.42)    		 BS01 >2h1k:E (identical to 2h1k:C)
    agaaactcattagag
    		 ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    3954 2h1k:B
    (2.42)    		 BS02 >2h1k:F (identical to 2h1k:D)
    tctctaatgagtttc
    		 ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    3955 2h1o:A
    (3.0)    		 BS01 >2h1o:U (identical to 2bsq:I)
    agattgctatcattttttttattttgatagcatutg
    		 3.1.-.- GO:0000287 ... Q5F882 16982615
    3956 2h1o:E
    (3.0)    		 BS01 >2h1o:U (identical to 2bsq:I)
    agattgctatcattttttttattttgatagcatutg
    		 ? GO:0006355 ... Q5F881 16982615
    3957 2h1o:E
    (3.0)    		 BS02 >2h1o:V (identical to 2bsq:J)
    caaatgctatcaaaauaaaaaaaatgatagcaatct
    		 ? GO:0006355 ... Q5F881 16982615
    3958 2h1o:F
    (3.0)    		 BS01 >2h1o:U (identical to 2bsq:I)
    agattgctatcattttttttattttgatagcatutg
    		 ? GO:0006355 ... Q5F881 16982615
    3959 2h1o:F
    (3.0)    		 BS02 >2h1o:V (identical to 2bsq:J)
    caaatgctatcaaaauaaaaaaaatgatagcaatct
    		 ? GO:0006355 ... Q5F881 16982615
    3960 2h1o:G
    (3.0)    		 BS01 >2h1o:U (identical to 2bsq:I)
    agattgctatcattttttttattttgatagcatutg
    		 ? GO:0006355 ... Q5F881 16982615
    3961 2h1o:G
    (3.0)    		 BS02 >2h1o:V (identical to 2bsq:J)
    caaatgctatcaaaauaaaaaaaatgatagcaatct
    		 ? GO:0006355 ... Q5F881 16982615
    3962 2h1o:H
    (3.0)    		 BS01 >2h1o:U (identical to 2bsq:I)
    agattgctatcattttttttattttgatagcatutg
    		 ? GO:0006355 ... Q5F881 16982615
    3963 2h27:A
    (2.3)    		 BS01 >2h27:B (identical to 2h27:E)
    cccggaacttcg
    		 ? GO:0003677 ... P0AGB6 16903784
    3964 2h27:A
    (2.3)    		 BS02 >2h27:C (identical to 2h27:F)
    cgaagttccgg
    		 ? GO:0003677 ... P0AGB6 16903784
    3965 2h27:D
    (2.3)    		 BS01 >2h27:E (identical to 2h27:B)
    cccggaacttcg
    		 ? GO:0003677 ... P0AGB6 16903784
    3966 2h27:D
    (2.3)    		 BS02 >2h27:F (identical to 2h27:C)
    cgaagttccgg
    		 ? GO:0003677 ... P0AGB6 16903784
    3967 2h3a:A
    (-1.00)    		 BS01 >2h3a:C (identical to 2h3c:C)
    atatgtatacccg
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    3968 2h3a:A
    (-1.00)    		 BS02 >2h3a:D (identical to 2h3c:D)
    tcgggtatacata
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    3969 2h3a:B
    (-1.00)    		 BS01 >2h3a:C (identical to 2h3c:C)
    atatgtatacccg
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    3970 2h3a:B
    (-1.00)    		 BS02 >2h3a:D (identical to 2h3c:D)
    tcgggtatacata
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    3971 2h3c:A
    (-1.00)    		 BS01 >2h3c:C (identical to 2h3a:C)
    atatgtatacccg
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=88.5uM
    3972 2h3c:A
    (-1.00)    		 BS02 >2h3c:D (identical to 2h3a:D)
    tcgggtatacata
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=88.5uM
    3973 2h3c:B
    (-1.00)    		 BS01 >2h3c:D (identical to 2h3a:D)
    tcgggtatacata
    		 ? GO:0003677 ... P62552 17007877 PDBbind: Kd=88.5uM
    3974 2h7f:X
    (2.7)    		 BS01 >2h7f:Y
    ttgtcgccctt
    		 5.6.2.1 GO:0003677 ... P32989 16885024
    3975 2h7f:X
    (2.7)    		 BS02 >2h7f:Z (identical to 2h7g:Z)
    taataagggcgaca
    		 5.6.2.1 GO:0003677 ... P32989 16885024
    3976 2h7g:X
    (1.9)    		 BS01 >2h7g:Y
    ttgtcgccctta
    		 5.6.2.1 GO:0003677 ... P32989 16885024
    3977 2h7g:X
    (1.9)    		 BS02 >2h7g:Z (identical to 2h7f:Z)
    taataagggcgaca
    		 5.6.2.1 GO:0003677 ... P32989 16885024
    3978 2h7h:A
    (2.3)    		 BS01 >2h7h:X
    cgtcgatgactcatcgacg
    		 ? GO:0003677 ... P05411 N/A
    3979 2h7h:A
    (2.3)    		 BS02 >2h7h:Y
    cgtcgatgagtcatcgacg
    		 ? GO:0003677 ... P05411 N/A
    3980 2h7h:B
    (2.3)    		 BS01 >2h7h:X
    cgtcgatgactcatcgacg
    		 ? GO:0003677 ... P05411 N/A
    3981 2h7h:B
    (2.3)    		 BS02 >2h7h:Y
    cgtcgatgagtcatcgacg
    		 ? GO:0003677 ... P05411 N/A
    3982 2h8c:B
    (3.1)    		 BS01 >2h8c:W (identical to 2h8c:Y, 2h8c:X)
    ccggtaccggt
    		 3.1.21.10 GO:0000287 ... P0AG74 17028102
    3983 2h8c:B
    (3.1)    		 BS02 >2h8c:X (identical to 2h8c:Y, 2h8c:W)
    ccggtaccggt
    		 3.1.21.10 GO:0000287 ... P0AG74 17028102
    3984 2h8c:C
    (3.1)    		 BS01 >2h8c:Y (identical to 2h8c:W, 2h8c:X)
    ccggtaccggt
    		 3.1.21.10 GO:0000287 ... P0AG74 17028102
    3985 2h8r:A
    (3.2)    		 BS01 >2h8r:E
    cttggttaataattcaccag
    		 ? GO:0001889 ... P35680 17924661
    3986 2h8r:A
    (3.2)    		 BS02 >2h8r:F
    gctggtgaattattaaccaa
    		 ? GO:0001889 ... P35680 17924661
    3987 2h8r:B
    (3.2)    		 BS01 >2h8r:E
    cttggttaataattcaccag
    		 ? GO:0001889 ... P35680 17924661
    3988 2h8r:B
    (3.2)    		 BS02 >2h8r:F
    gctggtgaattattaaccaa
    		 ? GO:0001889 ... P35680 17924661
    3989 2han:A
    (1.95)    		 BS01 >2han:C (identical to 4umm:C)
    caagggttcaatgcacttgt
    		 ? GO:0003700 ... P20153 17426125
    3990 2han:A
    (1.95)    		 BS02 >2han:D (identical to 4umm:D)
    gacaagtgcattgaaccctt
    		 ? GO:0003700 ... P20153 17426125
    3991 2han:B
    (1.95)    		 BS01 >2han:C (identical to 4umm:C)
    caagggttcaatgcacttgt
    		 ? GO:0003700 ... P34021 17426125
    3992 2han:B
    (1.95)    		 BS02 >2han:D (identical to 4umm:D)
    gacaagtgcattgaaccctt
    		 ? GO:0003700 ... P34021 17426125
    3993 2hap:C
    (2.5)    		 BS01 >2hap:A (identical to 1qp9:E, 1qp9:G)
    acgctattatcgctattagt
    		 ? GO:0000981 ... P0CS82 9886287
    3994 2hap:C
    (2.5)    		 BS02 >2hap:B (identical to 1qp9:F)
    actaatagcgataatagcgt
    		 ? GO:0000981 ... P0CS82 9886287
    3995 2hap:D
    (2.5)    		 BS01 >2hap:A (identical to 1qp9:E, 1qp9:G)
    acgctattatcgctattagt
    		 ? GO:0000981 ... P0CS82 9886287
    3996 2hap:D
    (2.5)    		 BS02 >2hap:B (identical to 1qp9:F)
    actaatagcgataatagcgt
    		 ? GO:0000981 ... P0CS82 9886287
    3997 2hax:A
    (1.29)    		 BS01 >2hax:C (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2gxa:M, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 ? GO:0003676 ... P41016 17266726
    3998 2hax:A
    (1.29)    		 BS02 >2hax:D (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2gxa:M, 2hax:C, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 ? GO:0003676 ... P41016 17266726
    3999 2hax:B
    (1.29)    		 BS01 >2hax:C (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2gxa:M, 2hax:D, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 ? GO:0003676 ... P41016 17266726
    4000 2hax:B
    (1.29)    		 BS02 >2hax:D (identical to 4a75:D, 4a75:H, 8dqx:I, 2es2:B, 5fhe:C, 5fte:D, 8gms:S, 8gmt:S, 8gmu:S, 2gxa:M, 2hax:C, 8hwa:S, 8hwb:S, 8hwf:S, 8hwg:S, 8hwh:S, 5ip3:F, 8jpx:E, 8jpx:F, 3kqk:C, 3kqk:D, 3kql:E, 3kql:F, 3kqn:E, 7lar:G, 4ljr:C, 1mje:C, 2mna:B, 5o6d:C, 5o6d:D, 7otj:C, 7otj:D, 4oww:L, 4s0n:E, 6s3h:D, 6s3n:C, 8xj7:X, 8xj8:X, 7ywa:S)
    tttttt
    		 ? GO:0003676 ... P41016 17266726
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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