BioLiP

Structure of PDB 8u72 Chain H

Receptor sequence

>8u72H (length=417) Species: 1393122 (Thermoflavifilum thermophilum) [Search protein sequence]

MRNKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDKGVDFWSTIE
KEIRENTCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAID
ENLSYDDINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPKKHSKSNLL
YQQIFLHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDVRTL
AFPAIRYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGRYDT
DFIRNYECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKLEKD
KFEKIKLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINLIKS
KSIQHSSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEKILI
SNKPLKFFGKMSYVTPS

3D structure

PDB

8u72 Nucleic acid mediated activation of prokaryotic Argonaute immune system

Chain

Resolution

3.15 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	H	Y210 K211 E212 R263 M287 S288 K289 H340 R362	Y207 K208 E209 R260 M284 S285 K286 H337 R359
BS02	dna	H	R201 R263 V266 Q267 N270 H358	R198 R260 V263 Q264 N267 H355

External links

PDB	RCSB:8u72, PDBe:8u72, PDBj:8u72
PDBsum	8u72
PubMed	38844755
UniProt	A0A1I7NFG5

[Back to BioLiP]

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417