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BioLiP

Structure of PDB 8hwf Chain D

Receptor sequence
>8hwfD (length=378) Species: 10244 (Monkeypox virus) [Search protein sequence]
GNKLFNIAQRILDTNSVLLTERGDHIVWINNSWKFNSEEPLITKLILSIR
HQLPKEYSSELLCPRKRKTVEANIRDMLVDSVETDTYPDKLPFKNGVLDL
VDGMFYSGDDAKKYTCTVSTGFKFDDTKFVEDSPEMEELMNIINDIQPLT
DENKKNRELYEKTLSSCLCGATKGCLTFFFGETATGKSTTKRLLKSAIGD
LFVETGQTILTDVLDKGPNPFIANMHLKRSVFCSELPDFACSGSKKIRSD
NIKKLTEPCVIGRPCFSNKINNRNHATIIIDTNYKPVFDRIDNALMRRIA
VVRFRTHFSQPSGREAAENNDAYDKVKLLDEGLDGKIQNNRYRFAFLYLL
VKWYKKYHIPIMKLYPTPEEIPDFAFYL
3D structure
PDB8hwf Structural insight into the assembly and working mechanism of helicase-primase D5 from Mpox virus.
ChainD
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna D P540 R585 F588 P218 R263 F266
BS02 ADP D I464 D467 A506 T507 G508 K509 S510 T511 F630 L650 L651 D652 L655 I142 D145 A184 T185 G186 K187 S188 T189 F308 L328 L329 D330 L333
Gene Ontology
Molecular Function
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
Cellular Component
GO:0030430 host cell cytoplasm

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:8hwf, PDBe:8hwf, PDBj:8hwf
PDBsum8hwf
PubMed38177671
UniProtA0A7H0DN89|PG117_MONPV Uncoating factor OPG117 (Gene Name=OPG117)

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