Structure of PDB 1ncr Chain C

Receptor sequence

>1ncrC (length=238) Species: 31708 (rhinovirus A16) [Search protein sequence]

GLPVYVTPGSGQFMTTDDMQSPCALPWYHPTKEIFIPGEVKNLIEMCQVD
TLIPINSTQSNIGNVSMYTVTLSPQTKLAEEIFAIKVDIASHPLATTLIG
EIASYFTHWTGSLRFSFMFCGTANTTLKVLLAYTPPGIGKPRSRKEAMLG
THVVWDVGLQSTVSLVVPWISASQYRFTTPDTYSSAGYITCWYQTNFVVP
PNTPNTAEMLCFVSGCKDFCLRMARDTDLHKQTGPITQ

3D structure

PDB

1ncr Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds

Chain

Resolution

2.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

2.7.7.48: RNA-directed RNA polymerase.
3.4.22.28: picornain 3C.
3.4.22.29: picornain 2A.
3.6.1.15: nucleoside-triphosphate phosphatase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	C	D18 Q20 S21 P22 C23	D18 Q20 S21 P22 C23

Gene Ontology

	Molecular Function
GO:0005198	structural molecule activity

View graph for
Molecular Function

External links

PDB	RCSB:1ncr, PDBe:1ncr, PDBj:1ncr
PDBsum	1ncr
PubMed	15452226
UniProt	Q82122\|POLG_HRV16 Genome polyprotein

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