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BioLiP

Structure of PDB 1llm Chain C

Receptor sequence
>1llmC (length=87) Species: 10090,559292 [Search protein sequence]
MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH
RDIQHILPILEDKVEELLSKNYHLENEVARLKKLVGE
3D structure
PDB1llm Structure of a designed dimeric zinc finger protein bound to DNA.
ChainC
Resolution1.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C D117 S144 D145 K148 R149 D17 S44 D45 K48 R49
BS02 dna C R111 S114 R115 H118 H122 T125 R139 F141 R143 E146 H150 Q154 R11 S14 R15 H18 H22 T25 R39 F41 R43 E46 H50 Q54
BS03 ZN C C106 C109 H122 H126 C6 C9 H22 H26
BS04 ZN C C134 C137 H150 H155 C34 C37 H50 H55
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1llm, PDBe:1llm, PDBj:1llm
PDBsum1llm
PubMed14621985
UniProtP03069|GCN4_YEAST General control transcription factor GCN4 (Gene Name=GCN4);
P08046|EGR1_MOUSE Early growth response protein 1 (Gene Name=Egr1)

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