Structure of PDB 4pv1 Chain A Binding Site BS05 | ||
|
Receptor Information
|
| IndexError | Python 3.6.8: /usr/bin/python3 Wed May 21 07:18:54 2025 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /var/www/html/BioLiP/pdb.cgi in <module>() |
| 1701 title=pdb2title(pdbid) |
| 1702 if bs.startswith("BS"): |
| => 1703 pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title) |
| 1704 else: |
| 1705 if lig3: |
| pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4pv1', asym_id = 'A', bs = 'BS05', title = 'Traffic within the cytochrome b6f lipoprotein complex: gating of the quinone portal.' |
| /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4pv1', asym_id='A', bs='BS05', title='Traffic within the cytochrome b6f lipoprotein complex: gating of the quinone portal.') |
| 956 p=subprocess.Popen(cmd,shell=True,stdout=subprocess.PIPE) |
| 957 stdout,stderr=p.communicate() |
| => 958 line =stdout.decode().splitlines()[0] |
| 959 items =line.split('\t') |
| 960 rhea ='\n'.join(["RHEA:"+r for r in items[2].split(',')]) |
| line = '4pv1\tA\tSMA\t1', stdout = b'', stdout.decode = <built-in method decode of bytes object>, ).splitlines undefined |
IndexError: list index out of range
args =
('list index out of range',)
with_traceback =
<built-in method with_traceback of IndexError object>