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Structure of PDB 4giu Chain A Binding Site BS04

Receptor Information
>4giu Chain A (length=346) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VPSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKA
PTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAA
IVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVG
IGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAF
ADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLT
FDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGA
IVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQ
Ligand information
Ligand ID636
InChIInChI=1S/C16H15NO4/c1-9-6-7-11(15(18)19)13(8-9)17-14-10(2)4-3-5-12(14)16(20)21/h3-8,17H,1-2H3,(H,18,19)(H,20,21)
InChIKeyAQDGEUMMMQRBPR-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6Cc1ccc(c(c1)Nc2c(cccc2C(=O)O)C)C(=O)O
CACTVS 3.370Cc1ccc(C(O)=O)c(Nc2c(C)cccc2C(O)=O)c1
ACDLabs 12.01O=C(O)c2c(Nc1c(cccc1C(=O)O)C)cc(cc2)C
FormulaC16 H15 N O4
Name2-[(2-carboxy-5-methylphenyl)amino]-3-methylbenzoic acid
ChEMBLCHEMBL4516463
DrugBank
ZINCZINC000034461226
PDB chain4giu Chain A Residue 404 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4giu Repurposing the Chemical Scaffold of the Anti-Arthritic Drug Lobenzarit to Target Tryptophan Biosynthesis in Mycobacterium tuberculosis.
Resolution1.667 Å
Binding residue
(original residue number in PDB)
G137 N138 A179 H183 Y186 R193 G206
Binding residue
(residue number reindexed from 1)
G114 N115 A156 H160 Y163 R170 G183
Annotation score1
Binding affinityMOAD: Ki=4.7uM
PDBbind-CN: -logKd/Ki=5.33,Ki=4.7uM
Enzymatic activity
Catalytic site (original residue number in PDB) V106
Catalytic site (residue number reindexed from 1) V83
Enzyme Commision number 2.4.2.18: anthranilate phosphoribosyltransferase.
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004048 anthranilate phosphoribosyltransferase activity
GO:0016757 glycosyltransferase activity
GO:0016763 pentosyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0000162 tryptophan biosynthetic process
Cellular Component
GO:0005576 extracellular region
GO:0005829 cytosol
GO:0005886 plasma membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:4giu, PDBe:4giu, PDBj:4giu
PDBsum4giu
PubMed24623674
UniProtP9WFX5|TRPD_MYCTU Anthranilate phosphoribosyltransferase (Gene Name=trpD)

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