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Structure of PDB 6gxm Chain v Binding Site BS02

Receptor Information
>6gxm Chain v (length=248) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASE
GEHGGYKEIIAKICGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTV
AVMPELPDAELPDINPADLRIDTFRSSGAGAQHVNTTDSAIRITHLPTGI
VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDR
SDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQAD
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6gxm Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		D122 P188 T190 E191 R195 I196 H197
Binding residue
(residue number reindexed from 1)		D19 P85 T87 E88 R92 I93 H94
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003747 translation release factor activity
GO:0016149 translation release factor activity, codon specific
Biological Process
GO:0006415 translational termination

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Molecular Function
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Biological Process
External links
PDB RCSB:6gxm, PDBe:6gxm, PDBj:6gxm
PDBsum6gxm
PubMed30076302
UniProtP0A7I0|RF1_ECOLI Peptide chain release factor RF1 (Gene Name=prfA)

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