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Structure of PDB 8vs9 Chain S03 Binding Site BS02

Receptor Information >8vs9 Chain S03 (length=206) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW IFKGEI

Ligand information >8vs9 Chain TMRN (length=363) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] ggggcugauucuggauucgacgggauuugcgaaacccaaggugcaugccg aggggcgguuggccucguaaaaagccgcaaaaaauagucgcaaacgacga aaacuacgcuuuagcagcuuaauaaccugcuuagagcccucucucccuag ccuccgcucuuaggacggggaucaagagaggucaaacccaaaagagaucg cguggaagcccugccugggguugaagcguuaaaacuuaaucaggcuaguu uguuaguggcguguccguccgcagcuggcaagcgaauguaaagacugacu aagcauguaguaccgaggauguaggaauuucggacgcggguucaacuccc gccagcuccacca <<<<<<<.............<<<<<<<<.......<...<<<..<<<<.. ....<<<<<..............>>>>>...................... .......<<<<<<<<<<.........>>>>.>>>>>><<<<<<<<<<<.. .....[(((((.....>>>>....>>>>>>>..........))))).].< <<.....<<<...((...>>>.....>>>.............))...... <<<<....<<...((.....>>....>>>>................)).. ..>>>>.....>>>...>......>>>>>>>>.....<<<.......>>> ..>>>>>>>....

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 8vs9 Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon. Resolution 3.9 Å Binding residue (original residue number in PDB) R71 P72 G73 I76 K78 K79 G80 N101 I102 R106 Q122 R125 R130 R131 K134 R135 R142 R163 Binding residue (residue number reindexed from 1) R71 P72 G73 I76 K78 K79 G80 N101 I102 R106 Q122 R125 R130 R131 K134 R135 R142 R163

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003676 nucleic acid binding GO:0003723 RNA binding GO:0003729 mRNA binding GO:0003735 structural constituent of ribosome GO:0019843 rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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