Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

Structure of PDB 5hr4 Chain J Binding Site BS02

Receptor Information
>5hr4 Chain J (length=751) Species: 17 (Methylophilus methylotrophus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPQDPINIKAAERMGKLHDTLKLVGYEGHALELYLVRLLFCLFAEDTTIF
EKSLFQEYIETKTLEDGSDLAHHINTLFYVLNTPEQKRLKNLDEHLAAFP
YINGKLFEEPLPPAQFDKAMREALLDLCSLDWSRISPAIFGSLFQSIMDA
KKRRNLGAHYTSEANILKLIKPLFLDELWVEFEKVKNNKNKLLAFHKKLR
GLTFFDPACGCGNFLVITYRELRLLEIEVLRGLHRGGQQVLDIEHLIQIN
VDQFFGIEIEEFPAQIAQVALWLTDHQMNMKISDEFGNYFARIPLKSTPH
ILNANALQIDWNDVLEAKKCCFILGNPPFVGKSKQTPGQKADLLSVFGNL
KSASDLDLVAAWYPKAAHYIQTNANIRCAFVSTNSITQGEQVSLLWPLLL
SLGIKINFAHRTFSWTNEASGVAAVHCVIIGFGLKDSDEKIIYEYESING
EPLAIKAKNINPYLRDGVDVIACKRQQPISKLPSMRYGNKPTDDGNFLFT
DEEKNQFITNEPSSEKYFRRFVGGDEFINNTSRWCLWLDGADISEIRAMP
LVLARIKKVQEFRLKSSAKPTRQSASTPMKFFYISQPDTDYLLIPETSSE
NRQFIPIGFVDRNVISSNATYHIPSAEPLIFGLLSSTMHNCWMRNVGGRL
ESRYRYSASLVYNTFPWIQPNEKQSKAIEEAAFAILKARSNYPNESLAGL
YDPKTMPSELLKAHQKLDKAVDSVYGFKGPNTEIARIAFLFETYQKMTSL
L
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5hr4 Structure of Type IIL Restriction-Modification Enzyme MmeI in Complex with DNA Has Implications for Engineering New Specificities.
Resolution2.5964 Å
Binding residue
(original residue number in PDB)
S488 K495 K506 K645 T647 D649 G679 D680 R688 S721 S722 A723 P725 T726 T752 S753 S754 R757 N773 A774 R808
Binding residue
(residue number reindexed from 1)
S333 K340 K351 K490 T492 D494 G524 D525 R533 S566 S567 A568 P570 T571 T597 S598 S599 R602 N618 A619 R653
Enzymatic activity
Enzyme Commision number 2.1.1.72: site-specific DNA-methyltransferase (adenine-specific).
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0032259 methylation

View graph for
Molecular Function

View graph for
Biological Process
External links

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417