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BioLiP

Structure of PDB 5z3v Chain A Binding Site BS02

Receptor Information
>5z3v Chain A (length=98) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
SAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Ligand information
>5z3v Chain J (length=146) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tcaggatgtatatatctgacacgtgcctggagactagggagtaatcccct
tggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgcta
gagctgtctacgaccaattgagcggcctcggcaccgggattctcga
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5z3v Mechanism of DNA translocation underlying chromatin remodelling by Snf2.
Resolution4.22 Å
Binding residue
(original residue number in PDB)		H39 Y41 R42 R63 R72 R83 F84 Q85 R116 V117
Binding residue
(residue number reindexed from 1)		H3 Y5 R6 R27 R36 R47 F48 Q49 R80 V81
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:5z3v, PDBe:5z3v, PDBj:5z3v
PDBsum5z3v
PubMed30867599
UniProtP84233|H32_XENLA Histone H3.2

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