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Structure of PDB 1vd5 Chain A Binding Site BS02

Receptor Information >1vd5 Chain A (length=377) Species: 84635 (Bacillus sp. GL1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] MWQQAIGDALGITARNLKKFGDRFPHVSDGSNKYVLNDNTDWTDGFWSGI LWLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHDIGFLYSLSAKAQ WIVEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDC LLNLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPE NGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMA RHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESD PERQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRGSYHVRGGISPDDYT IWGDYYYLEALLRLERGVTGYWYERGR

Ligand information Ligand ID GLY InChI InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5) InChIKey DHMQDGOQFOQNFH-UHFFFAOYSA-N SMILES Software SMILES OpenEye OEToolkits 1.5.0 C(C(=O)O)N CACTVS 3.341 NCC(O)=O ACDLabs 10.04 O=C(O)CN Formula C2 H5 N O2 Name GLYCINE ChEMBL CHEMBL773 DrugBank DB00145 ZINC ZINC000004658552 PDB chain 1vd5 Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 1vd5 Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution Resolution 1.8 Å Binding residue (original residue number in PDB) G320 R334 R335 Binding residue (residue number reindexed from 1) G320 R334 R335 Annotation score 1

Enzymatic activity Enzyme Commision number 3.2.1.179: gellan tetrasaccharide unsaturated glucuronosyl hydrolase.

Gene Ontology Molecular Function GO:0003824 catalytic activity GO:0016798 hydrolase activity, acting on glycosyl bonds GO:0052757 chondroitin hydrolase activity

	Biological Process
GO:0000272	polysaccharide catabolic process
GO:0005975	carbohydrate metabolic process

	Cellular Component
GO:0005737	cytoplasm

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