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Structure of PDB 1dgl Chain A Binding Site BS02

Receptor Information >1dgl Chain A (length=237) Species: 3837 (Macropsychanthus grandiflorus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] ADTIVAVELNSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQTGKVGTV HISYNSVAKRLSAVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLY KETNTILSWSFTSKLKTNSIADANSLHFSFHQFSQNPKDLILQGDAFTDS DGNLELTKVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTFLIK SPDREPADGITFFIANTDTSIPSGSGGRLLGLFPDAN

Ligand information Ligand ID MAN InChI InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1 InChIKey WQZGKKKJIJFFOK-PQMKYFCFSA-N SMILES Software SMILES OpenEye OEToolkits 1.5.0 C(C1C(C(C(C(O1)O)O)O)O)O CACTVS 3.341 OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O CACTVS 3.341 OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O OpenEye OEToolkits 1.5.0 C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O ACDLabs 10.04 OC1C(O)C(OC(O)C1O)CO Formula C6 H12 O6 Name alpha-D-mannopyranose; alpha-D-mannose; D-mannose; mannose ChEMBL CHEMBL365590 DrugBank ZINC ZINC000003860903 PDB chain 1dgl Chain C Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 1dgl Crystal structure of the lectin from Dioclea grandiflora complexed with core trimannoside of asparagine-linked carbohydrates. Resolution 2.4 Å Binding residue (original residue number in PDB) Y12 G98 L99 A207 D208 R228 Binding residue (residue number reindexed from 1) Y12 G98 L99 A207 D208 R228 Annotation score 4

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0005537 D-mannose binding GO:0030246 carbohydrate binding GO:0042802 identical protein binding GO:0046872 metal ion binding GO:0090729 toxin activity

	Biological Process
GO:0008150	biological_process
GO:0035821	modulation of process of another organism

	Cellular Component
GO:0005575	cellular_component

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