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Structure of PDB 8wi9 Chain t Binding Site BS01

Receptor Information >8wi9 Chain t (length=82) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] PRSLKKGPFVDDHLLKKVDVQNEKNTKQVIKTWSRRSTIIPDFIGHTFAV HDGRKHVPVFVTEAMVGHKLGEFAPTRTFKGH

Ligand information >8wi9 Chain a (length=1515) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uggagaguuugauccuggcucaggacgaacgcuggcggcgugcuuaacac augcaagucgaacggaaaggcccuuucggggguacucgaguggcgaacgg gugaguaacacgugggugaucugcccugcacuuugggauaagccugggaa acugggucuaauaccgaauacacccugcuggucgcauggccugguagggg aaagcuuuugcggugugggaugggcccgcggccuaucagcuuguuggugg ggugauggccuaccaaggcgacgacggguagccggccugagagggugacc ggccacacugggacugagauacggcccagacuccuacgggaggcagcagu ggggaauauugcacaaugggcgcaagccugaugcagcgacgccgcgugag ggaugacggccuucggguuguaaaccucuuucagcacagacgaagcgcaa gugacgguaugugcagaagaaggaccggccaacuacgugccagcagccgc gguaauacguaggguccgagcguuguccggaauuacugggcguaaagagc ucguaggugguuugucgcguuguucgugaaaacucacagcuuaacugugg gcgugcgggcgauacgggcagacuagaguacugcaggggagacuggaauu ccugguguagcgguggaaugcgcagauaucaggaggaacaccgguggcga aggcgggucucugggcaguaacugacgcugaggagcgaaagcguggggag cgaacaggauuagauacccugguaguccacgccguaaacgguggguacua gguguggguuuccuuccuugggauccgugccguagcuaacgcauuaagua ccccgccuggggaguacggccgcaaggcuaaaacucaaaggaauugacgg gggcccgcacaagcggcggagcauguggauuaauucgaugcaacgcgaag aaccuuaccuggguuugacaugcacaggacgccggcagagaugucgguuc ccuuguggccugugugcagguggugcauggcugucgucagcucgugucgu gagauguuggguuaagucccgcaacgagcgcaacccuugucucauguugc cagcacguuaugguggggacucgugagagacugccggggucaacucggag gaagguggggaugacgucaagucaucaugccccuuauguccagggcuuca cacaugcuacaauggccgguacaaagggcugcgaugccgugagguggagc gaauccuuucaaagccggucucaguucggaucggggucugcaacucgacc ccgugaagucggagucgcuaguaaucgcagaucagcaacgcugcggugaa uacguucccgggccuuguacacaccgcccgucacgucaugaaagucggua acacccgaagccgguggccuaacccuuguggagggagccgucgaaggugg gaucggcgauugggacgaagucguaacaagguagccguaccggaaggugc ggcuggaucaccucc ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<< .<<<..<<<..<<.<..<<<<<<<....>>>>>.>>>..>>>>>...... <<........<<<<<<<..<<...<<<<<<<<<<<<.....<<<<<<... .>>>>>>......>>>>.....<<<<<<<<<<<<..>>>>>.>>>>>>>. ...<<....>>>>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<< <.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...> >>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>> >.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<< <......<<<<....>>>>.....>>>>...<.<<<<<......<<.... >>.......>>>>>....>..<<<<<(((...<<<<<.....<<.)))>> .......>>>>>>>>>>..>>>>>>>>>..........<<<((.....<< <<...<<<.<<<<<<<.<<<<<<<<<<.....<<<<<<<.....>>>>>> >...>>>>>>>..>>>>>>>>>>...<<<<<<<<...<<<<<<<....<< <<<<<<<..<<<......>>>.....>>>>>>>>>...........<<.. ..>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<<<<...< <...<<<<.<.....>.>>>>...>>>>>>>>..........<<<<<<.. <<<<<<<<<<<<.......>>>>>>>>>>>>...<<..))>>.....>>> >>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<. <<<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>... .......<<<<<<<......<<<<<<<...<<<<<<<....>>>>>>>.< <.....>>.>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<.. ..>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<....< <..<<<......>>>>>.....>>>>>>.....<<<<<.....>>>>>.. ......>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>. >>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>> ....>>>......>>>>>>>......<....<<<<<<<........>>>> >>>....>.....>>>>>>....<<<<<<<..........>>>>>>>... ...>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<. .<<<<....<.<<<<..<<<..<<.....>>.>>>.>>>>.>...>>>>. .>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>> >>>>...........

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 8wi9 Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH. Resolution 3.5 Å Binding residue (original residue number in PDB) P2 R3 S4 L5 K6 K7 F10 H14 K18 W34 R36 R37 H52 G54 R55 K70 G72 E73 T77 R78 T79 F80 H83 Binding residue (residue number reindexed from 1) P1 R2 S3 L4 K5 K6 F9 H13 K17 W33 R35 R36 H51 G53 R54 K69 G71 E72 T76 R77 T78 F79 H82

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003723 RNA binding GO:0003735 structural constituent of ribosome GO:0019843 rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component