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Structure of PDB 8hl3 Chain S3AE Binding Site BS01

Receptor Information >8hl3 Chain S3AE (length=189) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] IRDKWKLKKWYVITAPKVFGEALLGSTPAYDINKALSRKIEVTLYDLTGD YNLVYIHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVV DVTTKDGYMLRVKGLVLTTYRAHISQKTAIRKVISDITRKKAEESDFDQF VQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAPKV

Ligand information >8hl3 Chain A16S (length=1492) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] auuccgguugauccugccggacccgaccgcuaucgggguagggauaagcc augggagucuuacacucccggguaagggaguguggcggacggcugaguaa cacguggcuaaccuacccucgggacggggauaaccccgggaaacugggga uaauccccgauagggaaggaguccuggaaugguuccuucccuaaagggcu auaggcuauuucccguuuguagccgcccgaggauggggcuacggcccauc aggcugucggugggguaaaggcccaccgaaccuauaacggguaggggccg uggaagcgggagccuccaguugggcacugagacaagggcccaggcccuac ggggcgcaccaggcgcgaaacguccccaaugcgcgaaagcgugagggcgc uaccccgagugccuccgcaggaggcuuuuccccgcucuaaaaaggcgggg gaauaagcggggggcaagucuggugucagccgccgcgguaauaccagcuc cgcgaguggucggggugauuacugggccuaaagcgccuguagccggccca ccaagucgccccuuaaaguccccggcucaaccggggaacugggggcgaua cuggugggcuagggggcgggagaggcgggggguacucccggaguaggggc gaaauccuuagauaccgggaggaccaccaguggcggaagcgccccgcuag aacgcgcccgacggugagaggcgaaagccggggcagcaaacgggauuaga uaccccgguagucccggcuguaaacgaugcgggcuaggugucgaguaggc uuagagccuacucggugccgcagggaagccguuaagcccgccgccugggg aguacggucgcaagacugaaacuuaaaggaauuggcgggggagcaccaca agggguggaaccugcggcucaauuggagucaacgccuggaaucuuaccgg gggagaccgcaguaugacggccaggcuaacgaccuugccugacucgcgga gaggaggugcauggccgucgccagcucguguugugaaauguccgguuaag uccggcaacgagcgagacccccaccccuaguugguauucuggacuccggu ccagaaccacacuagggggacugccggcguaagccggaggaaggaggggg ccacggcaggucagcaugccccgaaacucccgggccgcacgcggguuaca auggcagggacaacgggaugcuaccucaaagggggagccaauccuuaaac ccugccgcaguugggaucgagggcugaaacccgcccucgugaacgaggaa ucccuaguaaccgcgggucaacaacccgcggugaauacgucccugcuccu ugcacacaccgcccgucgcuccacccgagcgagaaaggggugaggucccu ugcgauaagugggggaucgaacuccuuucccgcgaggggggagaagucgu aacaagguagccguaggggaaccugcggcuggaucaccucau ...<<<<<.[.((((>>>>>.<<<<<<<<<<....<<<.<<......<<< .<<<..<<<..<<<<<<<<......>>>>>>>>>>>......<<...... ..<<.<<<<..<<...<<<<<<<.<<<<<....<<<<<......>>>>>. ....>>>>>...<<<<<<<<<.<<......>>>>>>>>>>>....<.<<< <<<<............>>>>>>>>.>>>>>>>..>>>>>>.>>.<<<... .<<...<<<<<<<<.......>>>>>>>>.>>......>>>..<<<<<<< <....>>>>...>>>>.>>.<<<<<............>>>>>.<<<<... .>>>>...>>>>>>.........<<<....<<<<....>>>>..>>>..> >..>>>....<<<<<<...>>>>>>...<<<<<<<.........>>>>>> >.....<<<<<((......<<<<.....<<..))>>.......>>>>.>> >>>.>>>>>>>>>>..........<<<((.....<<<<...<<<.<<<<< <<.<<<<<<<<<......<<<<<<<.....>>>>>>>....>>>>>>>.. >>>>>>>>>...<<<<<<.....<<<<<<<<<<.<<<<<<<....<<<.. ....>>>.......>>>>>>>.>>>.......<<....>>.>>>>>>>.. ..>>>.>>>...>>>...>>>>...<<<<<<<...<<...<<<<.<.... .>.>>>>...>>>>>>>>>.........<<<<<<..<<<<<<<<<<<<<< .....>>>>>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<. .....<<<<....>>>>....>>>..)))).]..<<<.<<<<<<<..<<. <<<<<<..<<<<<<<<<<......<<........>>..........<<<< <.<...<<<<<<......<<<.<<<.......>>>.>>>...>>.>>>>. ..<<.<<<..<<<<<<<<.....<<<<<<.<<....>>...<<<<..... .>>>>..>>>>>>....<<<<<.<<<<<<<..<<..<<.<<<<<....>> >>>.>>>>...>>>>>>>.....<<<<<....>>>>>........>>>>> .....>>.>>>...>>>>>>>>.....>>>>>>...>>.>>>>>>>>... ..<<<<<<<.....<<...<<<.<<<.....>>>.>>>....>>.....> >>>>>>......<....<<<<<<<........>>>>>>>....>.....> >>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>> >>>.......<..<<.<.<<<<.<<<..<<<.<<<<<<<<<..<<<<<<< <<<.....>>>>>>>>>>..>>>>>>>>>.>>>..>>>.>>>>..>.>>. ..>.....<<<<<<<<<....>>>>>>>>>............

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 8hl3 Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome Resolution 4.8 Å Binding residue (original residue number in PDB) K12 S45 K47 R98 R99 K100 S101 K103 V107 R119 Y128 H131 I132 T136 R139 K176 K177 I178 Y179 Binding residue (residue number reindexed from 1) K4 S37 K39 R90 R91 K92 S93 K95 V99 R111 Y120 H123 I124 T128 R131 K168 K169 I170 Y171

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005829	cytosol
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component