Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

Structure of PDB 4gpk Chain F Binding Site BS01

Receptor Information
>4gpk Chain F (length=341) Species: 1432 (Bacillus thuringiensis serovar thuringiensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RDVEEDVKGKLDEWLNALVHLDKQQVERIYEELQGEMKHVLDFEIINYYK
LLYTRYLIMKRDISALEEELDKLKKVYKKYSPFQKLLYMYGRGLLCCLQY
RWKDGLDYLLKTEVMAKEQGYHETGLYYNIALAYTHLDIHHLAIHFVNMA
LEGFRSEYKFRNIINCQILIAVSYTEKGQYEEALKMYESILREATSFADK
DVLLAITLSNMGSIYYKKGKYQQAKKYYLDSLQLQKQIDLNYLDTIYEMA
LVCIKLEELEEARTLIDKGIDAAKQEERFNAKLYLLLMLRYKYFEEAKDY
KAFLENEAIPVYVELAEHFSSLSRFEESNRYYRLVIDLMND
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4gpk Peptide-binding dependent conformational changes regulate the transcriptional activity of the quorum-sensor NprR.
Resolution3.2 Å
Binding residue
(original residue number in PDB)
L86 M124 R126 G190 Y193 N194 H201 I271 N275 N306 D309 E313
Binding residue
(residue number reindexed from 1)
L21 M59 R61 G125 Y128 N129 H136 I206 N210 N241 D244 E248
Enzymatic activity
Enzyme Commision number ?
External links

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417