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BioLiP

Structure of PDB 5jlx Chain D Binding Site BS01

Receptor Information
>5jlx Chain D (length=58) Species: 7227 (Drosophila melanogaster) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNR
RMKWKKEN
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5jlx Stereospecific Effects of Oxygen-to-Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein-DNA Affinity.
Resolution2.748 Å
Binding residue
(original residue number in PDB)		Y25 R31 Q50 R53 M54
Binding residue
(residue number reindexed from 1)		Y23 R29 Q48 R51 M52
Binding affinityPDBbind-CN: Kd=7.3nM
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5jlx, PDBe:5jlx, PDBj:5jlx
PDBsum5jlx
PubMed27271797
UniProtP02833|ANTP_DROME Homeotic protein antennapedia (Gene Name=Antp)

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