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BioLiP

Structure of PDB 3p9l Chain D Binding Site BS01

Receptor Information
>3p9l Chain D (length=278) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRWEPPP
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3p9l Affinity thresholds for naive CD8+ CTL activation by peptides and engineered influenza A viruses
Resolution2.0 Å
Binding residue
(original residue number in PDB)		Y7 E63 K66 N70 S73 F74 D77 Y84 Q114 T143 K146 E152 R155 L156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 E63 K66 N70 S73 F74 D77 Y84 Q114 T143 K146 E152 R155 L156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:3p9l, PDBe:3p9l, PDBj:3p9l
PDBsum3p9l
PubMed22039305
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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