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BioLiP

Structure of PDB 9c9m Chain A Binding Site BS01

Receptor Information
>9c9m Chain A (length=261) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAM
HGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYF
LLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGV
IESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERI
VDIIATDIQTKELQKQITKIQNFRVYYRKGPAKLLWKGEGAVVIQDNSDI
KVVPRRKAKII
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9c9m HIV-1 Intasomes Assembled with Excess Integrase C-Terminal Domain Protein Facilitate Structural Studies by Cryo-EM and Reveal the Role of the Integrase C-terminal Tail in HIV-1 Integration
Resolution2.01 Å
Binding residue
(original residue number in PDB)		H51 G52 Q53 V54 G140 I141 N144 Q146 S147 G149 V150 S153 M154
Binding residue
(residue number reindexed from 1)		H51 G52 Q53 V54 G140 I141 N144 Q146 S147 G149 V150 S153 M154
External links
PDB RCSB:9c9m, PDBe:9c9m, PDBj:9c9m
PDBsum9c9m
PubMed39066328
UniProtP12497|POL_HV1N5 Gag-Pol polyprotein (Gene Name=gag-pol)

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