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Structure of PDB 6vur Chain A Binding Site BS01

Receptor Information
>6vur Chain A (length=396) Species: 83332 (Mycobacterium tuberculosis H37Rv) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VTLCSPTEDDWPGMFLLAAASFTDFIGPESATAWRTLVPTDGAVVVRDGS
EVVGMALYMDLRLTVPGEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHR
RIADSGYPVAALHASEGGIYGRFGYGPATTLHELTVDRRFARFHADAPGG
GLGGSSVRLVRPTEHRGEFEAIYERWRQQVPGGLLRPQVLWDELLAEAKA
APGGDRESFALLHPDGYALYRVDRTDLKLARVSELRAVTADAHCALWRAL
IGLDSMERISIITHPQDPLPHLLTDTRLARTTWRQDGLWLRIMNVPAALE
ARGYAHEVGEFSTVLEVSDGGRFALKIGDGRARCTPTDAAAEIEMDRDVL
GSLYLGAHRASTLAAANRLRTKDSQLLRRLDAAFASDVPVQTAFEF
Ligand information
Ligand IDROG
InChIInChI=1S/C17H24N4S2/c1-21-8-4-5-11(9-21)10-22-17-19-15(18)14-12-6-2-3-7-13(12)23-16(14)20-17/h11H,2-10H2,1H3,(H2,18,19,20)/t11-/m0/s1
InChIKeyJTFCZCDNOWUZNN-NSHDSACASA-N
SMILES
SoftwareSMILES
CACTVS 3.385CN1CCC[CH](CSc2nc(N)c3c(sc4CCCCc34)n2)C1
OpenEye OEToolkits 2.0.7CN1CCCC(C1)CSc2nc(c3c4c(sc3n2)CCCC4)N
OpenEye OEToolkits 2.0.7CN1CCC[C@@H](C1)CSc2nc(c3c4c(sc3n2)CCCC4)N
CACTVS 3.385CN1CCC[C@H](CSc2nc(N)c3c(sc4CCCCc34)n2)C1
ACDLabs 12.01C1CCC(CN1C)CSc2nc(c3c(n2)sc4c3CCCC4)N
FormulaC17 H24 N4 S2
Name2-({[(3S)-1-methylpiperidin-3-yl]methyl}sulfanyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4-amine
ChEMBL
DrugBank
ZINC
PDB chain6vur Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6vur Structure-Guided Optimization of Inhibitors of Acetyltransferase Eis fromMycobacterium tuberculosis.
Resolution2.2 Å
Binding residue
(original residue number in PDB)
D26 A33 W36 F84
Binding residue
(residue number reindexed from 1)
D24 A31 W34 F78
Annotation score1
Binding affinityMOAD: ic50=0.15uM
Enzymatic activity
Enzyme Commision number 2.3.1.-
Gene Ontology
Molecular Function
GO:0008080 N-acetyltransferase activity
GO:0016746 acyltransferase activity
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups
GO:0034069 aminoglycoside N-acetyltransferase activity
GO:0042802 identical protein binding
GO:0061733 peptide-lysine-N-acetyltransferase activity
Biological Process
GO:0030649 aminoglycoside antibiotic catabolic process
GO:0033661 effector-mediated defense to host-produced reactive oxygen species
GO:0034054 symbiont-mediated suppression of host defense-related programmed cell death
GO:0046677 response to antibiotic
GO:0051701 biological process involved in interaction with host
GO:0052032 symbiont-mediated perturbation of host inflammatory response
GO:0052040 symbiont-mediated perturbation of host programmed cell death
GO:0052167 symbiont-mediated perturbation of host innate immune response
Cellular Component
GO:0005576 extracellular region
GO:0005829 cytosol
GO:0043655 host extracellular space
GO:0044161 host cell cytoplasmic vesicle
GO:0097691 bacterial extracellular vesicle

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6vur, PDBe:6vur, PDBj:6vur
PDBsum6vur
PubMed32421305
UniProtP9WFK7|EIS_MYCTU N-acetyltransferase Eis (Gene Name=eis)

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