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BioLiP

Structure of PDB 5m9o Chain A Binding Site BS01

Receptor Information
>5m9o Chain A (length=216) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAP
RRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTL
SPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQNTQCLLNV
EHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLN
AQESAKSARLNLWRYG
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5m9o Crystal structure of human SND1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
Resolution1.45 Å
Binding residue
(original residue number in PDB)		F686 F740 D742 Y746 Y763 Y766 N768
Binding residue
(residue number reindexed from 1)		F6 F60 D62 Y66 Y83 Y86 N88
Enzymatic activity
Enzyme Commision number 3.1.31.1: micrococcal nuclease.
External links
PDB RCSB:5m9o, PDBe:5m9o, PDBj:5m9o
PDBsum5m9o
PubMed
UniProtQ7KZF4|SND1_HUMAN Staphylococcal nuclease domain-containing protein 1 (Gene Name=SND1)

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