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BioLiP

Structure of PDB 4jrx Chain A Binding Site BS01

Receptor Information
>4jrx Chain A (length=276) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAP
WIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG
CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAA
RVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWEP
Ligand information
>4jrx Chain C (length=13) Species: 10376 (human gammaherpesvirus 4) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
LPEPLPQGQLTAY
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4jrx Highly divergent T-cell receptor binding modes underlie specific recognition of a bulged viral peptide bound to a human leukocyte antigen class I molecule.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		M5 Y7 R62 N63 I66 F67 T73 Y74 E76 S77 N80 Y84 Y99 S116 T143 K146 W147 Q155 R156 Y159 L163 W167 Y171
Binding residue
(residue number reindexed from 1)		M5 Y7 R62 N63 I66 F67 T73 Y74 E76 S77 N80 Y84 Y99 S116 T143 K146 W147 Q155 R156 Y159 L163 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links

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