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BioLiP

Structure of PDB 7ums Chain 1 Binding Site BS01

Receptor Information
>7ums Chain 1 (length=499) Species: 10912 (Rotavirus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQVDEDIIVSKTSLWKEMQYNRDIIIRFKFGNSIVKMGGLGYKWSEISYK
AANYQYNYLRDGEQVTAHTTCSVNGVNNFSYNGGFLPTDFGISRYEVIKE
NSYVYVDYWDDSKAFRNIVYVRSLAANLNSVRCTGGSYHFSLPVGAWPVI
NGGAVSLHFAGVTLSTQFTDFVSLNSLRFRFSLTVDEPPFSILRTRTVNL
YGLPAANPNNGNEYYEISGRFSLISLVPTNDDYQTPIMNSVTVRQDLERQ
LTNLREEFNSLSQEIAMAQLIDLALLPLDMFSMFSGIKSTIDLTKSMATS
VMKKFRKSKLATSISEMTNSLSDAASSANDISTQTSTIGKKLRLKEMITQ
TEGMSFDDISAAVLKTKIDMSTQIGKNTLPDIVTEASEKFIPKRSYRILK
DDEVMEINTEGKFFAYKINTFDEVPFDVNKFAELVTDSPVISAIIDFKTL
KNLNDNYGITRTEALNLIKSNPNMLRNFINQNNPIIRNRIEQLILQCKL
Ligand information
>7ums Chain V (length=25) Species: 10912 (Rotavirus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ASLIYRQLLTNSYSVDLYDEIEQIG
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7ums Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		K541 S542
Binding residue
(residue number reindexed from 1)		K295 S296
Enzymatic activity
Enzyme Commision number ?
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